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Taxonomy browser (Chlamydomonas reinhardtii)

Chlamydomonas reinhardtii

Taxonomy ID: 3055 (for references in articles please use NCBI:txid3055)
current name
Chlamydomonas reinhardtii P.A.Dangeard, 1888, nom. cons. 1)
epitype of Chlamydomonas reinhardtii: UTEX:90
includes:
Chlamydomonas reinhardtii strain CC-1373
NCBI BLAST name: green algae
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Chlamydomonas smithii R.W.Howshaw & H.Ettl
reference material of Chlamydomonas smithii: SAG:53.72, SAG:54.72
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 263,713 263,713 3
Protein 38,870 38,870 -
Structure 212 212 -
Genome 1 1 -
Popset 79 79 -
Conserved Domains 2 2 -
GEO Datasets 1,102 1,102 -
PubMed Central 10,192 10,192 -
Gene 14,490 14,490 -
SRA Experiments 3,305 3,305 -
Protein Clusters 6,978 6,978 -
Identical Protein Groups 31,413 31,413 -
Bio Project 1,260 1,260 -
Bio Sample 3,267 3,267 -
Bio Systems 577 577 -
Assembly 4 4 -
Probe 349 349 -
PubChem BioAssay 11 11 -
Taxonomy 2 1 -

Notes:

Comments and References:

Proeschold T et al. 2005
Proeschold T, Harris EH, Coleman AW. 2005. Portrait of a species: Chlamydomonas reinhardtii. Genetics. 170(4): 1601-1610.
Nozaki H et al. 2002
Nozaki H, Onishi K, Morita E. 2002. Differences in pyrenoid morphology are correlated with differences in the rbcL genes of members of the Chloromonas lineage (Volvocales, Chlorophyceae). Journal of Molecular Evolution. 55(4): 414-30.
Proeschold T et al. 2001
Proeschold T, Marin B, Schloesser UG and Melkonia M. 2001. Molecular phylogeny and taxonomic revision of Chlamydomonas (Chlorophyta). I. Emendation of Chlamydomonas Ehrenberg and Chloromonas Gobi, and description of Oogamochlamys gen. nov. and Lobochlamys gen. nov. Protist 152: 265-300.
Hoshaw RW & Ettl H 1966
Hoshaw RW and Ettl H. 1966. Chlamydomonas smithii sp. nov. - a chlamydomonad interfertile with Chlamydomonas reinhardtii. Journal of Phycology 2: 93-96.

Genome Information

Go to NCBI genomic BLAST page for Chlamydomonas reinhardtii
Genome view: 17 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Chlamydomonas reinhardtii taxonomy/phylogenetic AlgaeBase
dryaddb supplemental materials Dryad Digital Repository
Chlamydomonas reinhardtii P. A. Dangeard taxonomy/phylogenetic Encyclopedia of life
519 records from this provider organism-specific Genomes On Line Database
Chlamydomonas reinhardtii culture/stock collections Global Catalogue of Microorganisms
2 records from this provider organism-specific Integrated Microbial Genomes
Chlamydomonas reinhardtii Dangeard, 1899 taxonomy/phylogenetic Integrated Taxonomic Information System
EST Index clones/clone libraries Kazusa DNA Research Institute
Chlamydomonas reinhardtii taxonomy/phylogenetic Lifemap
2 records from this provider taxonomy/phylogenetic NCBI taxonomy bookmarks
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Chlamydomonas reinhardtii taxonomy/phylogenetic TreeBase
WebScipio: Chlamydomonas reinhardtii organism-specific WebScipio - eukaryotic gene identification
2 records from this provider taxonomy/phylogenetic World Register of Marine Species
diArk: Chlamydomonas reinhardtii organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.
Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. [Full text] [PubMed]


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