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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 23 30 -
BioSample 56 62 -
GEO DataSets 10 10 -
Gene 1 6,237 -
Identical Protein Groups 3,493 3,806 -
Nucleotide 1,405 1,418 13
PMC 16 16 -
Protein 33,825 40,156 -
SRA 26 33 -
Taxonomy 7 7 -

Francisella orientalis

Taxonomy ID: 299583 (for references in articles please use ncbitaxon:299583)
current name
Francisella orientalis  (Ottem et al. 2009) Ramirez-Paredes et al. 2020 in [Ramirez-Paredes JG et al. (2020)]
basionym:
Francisella noatunensis subsp. orientalis  Ottem et al. 2009 in  in  [Validation List No. 128 (2009)] , [Ottem KF et al. (2009)]
type strain of Francisella noatunensis subsp. orientalis: DSM : 21254 , BCCM/LMG : 24544 , personal : Ehime-1
includes:
Francisella sp. Ind04
Francisella sp. Ehime-1
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella

Comments and References:
Validation List No. 128 (2009)
Validation List No. 128: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2009) 59(7):1555-1556.
Ottem KF et al. (2009) , Pubmed: abstract
Ottem, K.F., Nylund, A., Karlsbakk, E., Friis-Moller, A., and Kamaishi, T. "Elevation of Francisella philomiragia subsp. noatunensis Mikalsen et al. (2007) to Francisella noatunensis comb. nov. [syn. Francisella piscicida Ottem et al. (2008) syn. nov.] and characterization of Francisella noatunensis subsp. orientalis subsp. nov., two important fish pathogens." J. Appl. Microbiol. (2009) 106(4):1231-1243.
Ramirez-Paredes JG et al. (2020) , Pubmed: abstract
Ramirez-Paredes, J.G., Larsson, P., Thompson, K.D., Penman, D.J., Busse, H.-J., Öhrman, C., Sjödin, A., Soto, E., Richards, R.H., Adams, A., and Colquhoun, D.J. "Reclassification of Francisella noatunensis subsp. orientalis Ottem 2009 as Francisella orientalis sp. nov., Francisella noatunensis subsp. subsp. nov. and emended description of Francisella noatunensis." Int. J. Syst. Evol. Microbiol. (2020) 70(3):2034-2048.
VALIDATION LIST No. 128 (2009)
Validation List No. 128: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2009) 59:1555-1556.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Francisella orientalis type strain (BD-ID 5751) meta-databases BacDive
Francisella noatunensis F1 organism-specific BioCyc
Francisella noatunensis F1 organism-specific BioCyc
Francisella noatunensis F1 organism-specific BioCyc
Francisella noatunensis orientalis F1 organism-specific BioCyc
GOLD: 36 Organisms organism-specific Genomes On Line Database
Francisella noatunensis subsp. orientalis culture/stock collections Global Catalogue of Microorganisms
2654587564: Francisella noatunensis orientalis FNO190 organism-specific Integrated Microbial Genomes
2654587663: Francisella noatunensis orientalis FNO01 organism-specific Integrated Microbial Genomes
2744054685: Francisella noatunensis orientalis STIR-GUS-F2f7 organism-specific Integrated Microbial Genomes
8003677722: Francisella orientalis Victoria organism-specific Integrated Microbial Genomes
2987496939: Francisella noatunensis orientalis F1 organism-specific Integrated Microbial Genomes
Francisella orientalis type strain (SI-ID 363407) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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