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Taxonomy browser (Zostera marina)

Zostera marina

Taxonomy ID: 29655 (for references in articles please use NCBI:txid29655)
Scientific name: Zostera marina
current: Zostera marina
Inherited blast name: monocots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
   Entrez records   
Database name Direct links
Nucleotide 1,419
Nucleotide EST 10,659
Nucleotide GSS 181,478
Protein 21,166
Genome 1
Popset 37
GEO Datasets 31
PubMed Central 462
Gene 154
SRA Experiments 160
Identical Protein Groups 20,754
Bio Project 11
Bio Sample 159
Assembly 1
Clone DB 92,415
Taxonomy 1

Comments and References:

Nota BeneMonocot Checklist (Mar 18, 2011)
Name verified on 18 March 2011 in: World Checklist of Monocotyledons (2004). The Board of Trustees of the Royal Botanic Gardens, Kew. Published on the Internet.

Nota BeneTROPICOS (Mar 18, 2011)
Name verified on 18 March 2011 in: Tropicos.org. Missouri Botanical Garden, 2008 - 4344 Shaw Boulevard, Saint Louis, Missouri 63110, U.S.A. on line at: http://www.tropicos.org/

Nota BeneThe Plant List - Zostera

Reference to PubMed documentCoyer JA et al. 2008
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2701847/
Coyer JA, Miller KA, Engle JM, Veldskink J, Cabello-Pasini A, Stam WT and Olsen JL. 2008. Eelgrass meadows in the California Channel Islands and adjacent coast reveal a mosaic of two species, evidence for introgression and variable clonality. Annals of Botany 101(1): 73-87. PMCID: PMC2701847. doi: 10.1093/aob/mcm288

Nota BeneFNA - Zosteraceae
Haynes RR. 2000. Zosteraceae Dumortier. In Flora of North America Editorial Committee (Eds.) Flora of North America North of Mexico, Vol. 22: Magnoliophyta: Alismatidae, Arecidae, Commelinidae (in Part), and Zingiberidae. New York and Oxford. On-line version.


Genome Information

Go to NCBI genomic BLAST page for Zostera marina
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
CLONEEND ALL
JGI - Joint Genome Institute, U.S. Department of Energy
181,478 181,478
Totals per type
181,478 181,478

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Zostera marina taxonomy/phylogenetic AlgaeBase
2 records from this provider taxonomy/phylogenetic Arctos Specimen Database
Zostera marina L. taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0017907 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Zostera marina L. taxonomy/phylogenetic Integrated Taxonomic Information System
Zostera marina taxonomy/phylogenetic Ocean Biogeographic Information System
Zostera marina taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Zostera marina taxonomy/phylogenetic The International Plant Names Index
Zostera marina taxonomy/phylogenetic TreeBase
Zostera marina L. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Zostera marina organism-specific WebScipio - eukaryotic gene identification
Zostera marina Linnaeus, 1753 taxonomy/phylogenetic World Register of Marine Species
diArk: Zostera marina organism-specific diArk - a resource for eukaryotic genome research
Zostera marina taxonomy/phylogenetic electronic Plant Information Centre
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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