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Taxonomy browser (Borreliella garinii)

Borreliella garinii

Taxonomy ID: 29519 (for references in articles please use NCBI:txid29519)
current name
Borreliella garinii (Baranton et al. 1992) Adeolu and Gupta 2015
type strain of Borreliella garinii: ATCC:51383, CIP:103362, DSM:10534, personal::20047
basionym:
Borrelia garinii Baranton et al. 1992
includes:
Borrelia garinii subsp. garinii (Baranton et al. 1992) Hördt et al. 2020 in [VALIDATION LIST No. 194 (2020), Hördt A et al. (2020)]
NCBI BLAST name: spirochetes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Borrelia genomic group 20047
Lineage( full )
cellular organisms; Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 28,189 15,137 73
Protein 37,104 31,225 -
Structure 2 1 -
Genome 1 1 -
Popset 156 156 -
Conserved Domains 1 1 -
PubMed Central 884 884 -
Gene 6,197 2,493 -
SRA Experiments 313 274 -
Protein Clusters 814 814 -
Identical Protein Groups 38,008 36,568 -
BioProject 17 11 -
BioSample 364 322 5
Assembly 159 115 3
Taxonomy 40 1 -

Comments and References:
VALIDATION LIST No. 194 (2020), PubMed: abstract
Validation List No. 194: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2020) 70(7):4043-4049.
Hördt A et al. (2020), doi: 10.3389/fmicb.2020.00468, PubMed: abstract
Hördt, A., López, M.G., Meier-Kolthoff, J.P., Schleuning, M., Weinhold, L.-M., Tindall, B.J., Gronow, S., Kyrpides, N.C., Woyke, T., and Göker, M. "Analysis of 1,000+ type-strain genomes substantially improves taxonomic classification of Alphaproteobacteria." Front. Microbiol. (2020) 11:468.
Adeolu M & Gupta RS (2014)
Adeolu, M., and Gupta, R.S. "A phylogenomic and molecular marker based proposal for the division of the genus Borrelia into two genera: the emended genus Borrelia containing only the members of the relapsing fever Borrelia, and the genus Borreliella gen. nov. containing the members of the Lyme disease Borrelia (Borrelia burgdorferi sensu lato complex)." Antonie van Leeuwenhoek (2014) 105:1049-1072.
Baranton G et al. (1992)
Baranton, G., Postic, D., Saint Girons, I., Boerlin, P., Piffaretti, J.C., Assous, M., and Grimont, P.A. "Delineation of Borrelia burgdorferi sensu stricto, Borrelia garinii sp. nov., and group VS461 associated with Lyme borreliosis." Int. J. Syst. Bacteriol. (1992) 42:378-383.
VALIDATION LIST No. 163 (2015)
Validation List No. 163: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2015) 65:1105-1111.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Borrelia garinii meta-databases BacDive
2 records from this provider organism-specific BioCyc
Borrelia garinii Baranton et al. 1992 taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Genomes On Line Database
Borrelia garinii culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
3 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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