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Taxonomy browser (Photorhabdus asymbiotica)

Photorhabdus asymbiotica

Taxonomy ID: 291112 (for references in articles please use NCBI:txid291112)
current name
Photorhabdus asymbiotica Fischer-Le Saux et al. 1999 emend. Akhurst et al. 2004
type strain of Photorhabdus asymbiotica: ATCC:43950, CIP:106331, DSM:15149, personal::3265-86
NCBI BLAST name: enterobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Morganellaceae; Photorhabdus
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 165 94 29
Protein 14,502 13,030 -
Structure 19 8 -
Genome 1 1 -
Popset 8 8 -
PubMed Central 264 264 -
Gene 9,083 9,082 -
SRA Experiments 5 3 -
Protein Clusters 2,741 2,741 -
Identical Protein Groups 5,744 5,681 -
BioProject 5 2 -
BioSample 13 4 3
Assembly 2 2 1
Taxonomy 3 1 -

Comments and References:

Akhurst RJ et al. (2004)
Akhurst, R.J., Boemare, N.E., Janssen, P.H., Peel, M.M., Alfredson, D.A., and Beard, C.E. "Taxonomy of Australian clinical isolates of the genus Photorhabdus and proposal of Photorhabdus asymbiotica subsp. asymbiotica subsp. nov. and P. asymbiotica subsp. australis subsp. nov." Int. J. Syst. Evol. Microbiol. (2004) 54:1301-1310. Published online 19 July 2004. doi:10.1099/ijs.0.03005-0
Fischer-Le Saux M et al. (1999)
Fischer-Le Saux, M., Viallard, V., Brunel, B., Normand, P., and Boemare, N.E. "Polyphasic classification of the genus Photorhabdus and proposal of new taxa: P. luminescens subsp. luminescens subsp. nov., P. luminescens subsp. akhurstii subsp. nov., P. luminescens subsp. laumondii subsp. nov., P. temperata sp. nov., P. temperata subsp. temperata subsp. nov. and P. asymbiotica sp. nov." Int. J. Syst. Bacteriol. (1999) 49:1645-1656.
Machado RAR et al. (2018)
Machado, R.A.R., Wuthrich, D., Kuhnert, P., Arce, C.C.M., Thonen, L., Ruiz, C., Zhang, X., Robert, C.A.M., Karimi, J., Kamali, S., Ma, J., Bruggmann, R., and Erb, M. "Whole-genome-based revisit of Photorhabdus phylogeny: proposal for the elevation of most Photorhabdus subspecies to the species level and description of one novel species Photorhabdus bodei sp. nov., and one novel subspecies Photorhabdus laumondii subsp. clarkei subsp. nov." Int. J. Syst. Evol. Microbiol. (2018) 68(8):2664–2681.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Photorhabdus asymbiotica meta-databases BacDive
GOLD: Go0044320 organism-specific Genomes On Line Database
2784746756: Photorhabdus asymbiotica asymbiotica DSM 15149 organism-specific Integrated Microbial Genomes
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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