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Taxonomy browser (Pseudomonas aeruginosa)

Pseudomonas aeruginosa

Taxonomy ID: 287 (for references in articles please use NCBI:txid287)
current name
Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980) in [Skerman VBD et al. (1980)]
type strain of Pseudomonas aeruginosa: ATCC:10145, ATCC:10145-U, CCEB:481, CCUG:28447, CCUG:29297, CCUG:551, CFBP:2466, CIP:100720, DSM:50071, IBCS:277, IFO:12689, JCM:5962, BCCM/LMG:1242, NBRC:12689, NCCB:76039, NCIMB:8295, NCTC:10332, NRRL:B-771, RH:815, VKM:B-588, ICPB:2523
basionym:
"Bacterium aeruginosum" Schroeter 1872, effective name 1)
homotypic synonym:
"Bacterium aeruginosum" Cohn 1872, effective name 2)
"Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885, effective name 3)
Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980) emend. Rudra et al. 2022, emended name 4) in [Rudra B et al. (2022)]
probable synonym or variety: "Pseudomonas polycolor" Clara 1930
includes:
Pseudomonas sp. 2_1_26
Pseudomonas sp. ACP_02
Pseudomonas sp. BRD1
Pseudomonas sp. CRRI 93
Pseudomonas sp. MM
Pseudomonas sp. PR_01
Pseudomonas sp. PSE5
Pseudomonas sp. RV3
bacterium ASFP-37
bacterium ASFP-38
bacterium ASFP-45
bacterium ASFP-46
bacterium ASFP-48
Pseudomonas sp. HSA1/2016
Pseudomonas sp. UFT2/2016
Pseudomonas sp. NCIM 2036
Pseudomonas sp. NCIM 2862
bacterium CRM125
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Micrococcus pyocyaneus" Zopf 1884, effective name 5)
heterotypic synonym
"Pseudomonas pyocyanea" (Zopf 1884) Migula 1895, effective name 6)
heterotypic synonym
Pseudomonas polycolor
heterotypic synonym
"Bacillus pyocyaneus" (Zopf 1884) Flugge 1886, effective name 7)
heterotypic synonym
"Bacterium pyocyaneum" (Zopf 1884) Lehmann and Neumann 1896, effective name 8)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 3,373,098 3,231,164 7,487
Protein 26,475,254 24,990,986 -
Structure 3,048 1,533 -
Conserved Domains 9 7 -
GEO Datasets 9,497 5,099 -
PubMed Central 125,140 125,140 -
Gene 121,724 3,304 -
SRA Experiments 77,822 65,255 -
GEO Profiles 141,600 141,600 -
Protein Clusters 7,547 7,547 -
Identical Protein Groups 4,793,024 4,761,903 -
BioProject 3,774 2,959 -
BioSample 97,182 85,313 19
Datasets Genome 47,049 46,582 -
Genetic Testing Registry 5 5 -
PubChem BioAssay 14,581 14,088 -
Taxonomy 382 1 -

Notes:

Comments and References:
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Rudra B et al. (2022), PubMed: abstract
Rudra, B., Duncan, L., Shah, A.J., Shah, H.N., and Gupta, R.S. "Phylogenomic and comparative genomic studies robustly demarcate two distinct clades of Pseudomonas aeruginosa strains: proposal to transfer the strains from an outlier clade to a novel species Pseudomonas paraeruginosa sp. nov." Int. J. Syst. Evol. Microbiol. (2022) 72(11):005542.
genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Cohn F (1872)
Cohn, F. "Untersuchungen uber Bakterien." Beitrage zur Biologie der Pflanzen, 1875 1 (Heft 2) (1872) 1:127-224. [No PubMed record available.]
Flügge C (1886)
Flügge, C. Die Microorganismen. (1886) F.C.W. Vogel, Leipzig. [No PubMed record available.]
Lapage SP et al. (1992) (reference with type strain information)
Lapage, S.P., Sneath, P.H.A., Lessel, E.F., Skerman, V.B.D., Seeliger, H.P.R., and Clark, W.A. "International Code of Nomenclature of Bacteria (1990 revision)." American Society for Microbiology, Washington, D.C. (1992). [No PubMed record available.]
Lehmann KB & Neumann R (1896)
Lehman, K.B., and Neumann, R. Atlas und Grundriss der Bakeriologie und Lehrbuch der speziellen bakteriologischen Diagnositk. 1st Ed., (1896) J.F. Lehmann, Munchen. [No PubMed record available.]
Migula W (1895)
Migula, W. "Bacteriaceae (Stabchenbacterien)." In: Engler and Prantl (Editors), Die Naturlichen Pflanzenfamilien. (1895) W. Engelmann, Leipzig, Teil I Abt. 1a, pp.20-30. [No PubMed record available.]
Migula W (1900)
Migula, W. System der Bakterien, Vol. 2. (1900) Gustav Fischer, Jena. [No PubMed record available.]
Schroeter J (1872)
Schroeter, J. "Uber einige durch Bacterien gebildete Pigmente. (1872)". In: F. Cohn (ed.), Beitrage zur Biologie der Pflanzen. J.U. Kern's Verlag, Breslau, 1875, pp. 109-126. [No PubMed record available.]
Trevisan V (1885)
Trevisan, V. "Caratteri di alcuni nuovi generi di Batteriaceae [Characteristics of some new genera of Bacteriaceae]." Atti. Accad. Fis.-Med.-Stat. Milano (Ser 4) (1885) 3:92-106. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pseudomonas aeruginosa meta-databases BacDive - Free access to bacterial information database
352 records from this provider organism-specific BioCyc
dryaddb supplemental materials Dryad Digital Repository - Access Curated Datasets
Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD: 4155 Organisms organism-specific Genomes On Line Database
Pseudomonas aeruginosa culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
679 records from this provider organism-specific Integrated Microbial Genomes
Pseudomonas aeruginosa taxonomy/phylogenetic Lifemap
Pseudomonas Genome Project taxonomy/phylogenetic NCBI taxonomy bookmarks
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Pseudomonas aeruginosa (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
3 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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