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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
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Database name Direct links Subtree links Links from type
BioProject 16 209 -
BioSample 45 4,163 -
Conserved Domains 23 25 -
GEO DataSets - 39 -
Identical Protein Groups 3 919,466 -
Nucleotide 13 147,036 472
PMC 5,927 6,018 -
Protein 3 574,483 -
SRA 29 286 -
Structure 3 3 -
Taxonomy 1,329 1,329 -

Deltaproteobacteria

Taxonomy ID: 28221 (for references in articles please use ncbitaxon:28221)
current name
Deltaproteobacteria  Kuever et al. 2006 emend. Hahn et al. 2017
includes:
Dissimilatory sulfate or sulfur reducers
Sulfate- or sulfur-reducing dissimilatory bacteria
Sulfate-reducing or sulfur-reducing dissimilatory bacteria
Genbank common name: d-proteobacteria
NCBI BLAST name: d-proteobacteria
Rank: class
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym delta subgroup
heterotypic synonym delta subdivision
heterotypic synonym delta proteobacteria
heterotypic synonym Purple bacteria, delta subdivision
heterotypic synonym Proteobacteria delta subdivision
heterotypic synonym "Deltabacteria" Cavalier-Smith 1992
heterotypic synonym Deltabacteria Cavalier-Smith 2002
blast name d-proteobacteria
Lineage(full)
cellular organisms; Bacteria; delta/epsilon subdivisions

Comments and References:

Cavalier-Smith T (2002)
Cavalier-Smith, T. "The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification." Int. J. Syst. Evol. Microbiol. (2002) 52(1):7-76.
Hahn MW et al. (2017)
Hahn, M.W., Schmidt, J., Koll, U., Rohde, M., Verbarg, S., Pitt, A., Nakai, R., Naganuma, T., and Lang, E. "Silvanigrella aquatica gen. nov., sp. nov., isolated from a freshwater lake, description of Silvanigrellaceae fam. nov. and Silvanigrellales ord. nov., reclassification of the order Bdellovibrionales in the class Oligoflexia, reclassification of the families Bacteriovoracaceae and Halobacteriovoraceae in the new order Bacteriovoracales ord. nov., and reclassification of the family Pseudobacteriovoracaceae in the order Oligoflexales." Int. J. Syst. Evol. Microbiol. (2017) 67(8):2555-2568.
Kuever J et al. (2005)
Kuever, J., Rainey, F.A., and Widdel, F. "Class IV. Deltaproteobacteria class. nov." In: D.J. Brenner,, N.R. Krieg, J.T. Staley, and G.M. Garrity (eds), Bergey's Manual of Systematic Bacteriology, second edition, vol. 2 (The Proteobacteria), part C (The Alpha-, Beta-, Delta-, and Epsilonproteobacteria), Springer, New York, 2005, p. 922. [No PubMed record available.]
Oren A et al. (2016)
Oren, A., Parte, A., and Garrity, G.M. "Implementation of Rule 8 of the International Code of Nomenclature of Prokaryotes for the renaming of classes. Request for an Opinion." Int. J. Syst. Evol. Microbiol. (2016) 66(10):4296-4298.
VALIDATION LIST No. 107 (2006)
Validation List No. 107. "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2006) 56:1-6. [Erratum: Int. J. Syst. Evol. Microbiol. (2006) 56:677.]
Waite DW et al. (2020b)
Waite, D.W., Chuvochina, M., Pelikan, C., Parks, D.H., Yilmaz, P., Wagner, M., Loy, A., Naganuma, T., Nakai, R., Whitman, W.B., Hahn, M.W., Kuever, J., and Hugenholtz, P. "Proposal to reclassify the proteobacterial classes Deltaproteobacteria and Oligoflexia, and the phylum Thermodesulfobacteria into four phyla reflecting major functional capabilities." Int. J. Syst. Evol. Microbiol. (2020) 70(11):5972-6016.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Deltaproteobacteria taxonomy/phylogenetic Encyclopedia of life
2684622989: Deltaproteobacteria bacterium SCGC AG-542-J17 organism-specific Integrated Microbial Genomes
2893478082: Unclassified Deltaproteobacteria bacterium S6_FULL_No.2_5.2_93 organism-specific Integrated Microbial Genomes
2811994943: unclassified Deltaproteobacteria BinDmb302 organism-specific Integrated Microbial Genomes
2811994909: unclassified Deltaproteobacteria BinDmb239 organism-specific Integrated Microbial Genomes
2795385393: unclassified Deltaproteobacterium ORM2_a organism-specific Integrated Microbial Genomes
2893480180: Unclassified Deltaproteobacteria bacterium S6_FULL_No.4_1.2_94 organism-specific Integrated Microbial Genomes
2893475991: Unclassified Deltaproteobacteria bacterium S6_FULL_No.1_5.4_94 organism-specific Integrated Microbial Genomes
2770939333: unclassified Deltaproteobacteria Obs2_genome_004 Obs2_genome_004 organism-specific Integrated Microbial Genomes
2893486174: Unclassified Deltaproteobacteria bacterium S19_FULL_No.1_6.2_93 organism-specific Integrated Microbial Genomes
2811994973: unclassified Deltaproteobacteria BinDGmb61 organism-specific Integrated Microbial Genomes
2811994945: unclassified Deltaproteobacteria BinDm132 organism-specific Integrated Microbial Genomes
2814122922: unclassified Deltaproteobacteria BinDGm209 organism-specific Integrated Microbial Genomes
2811994905: unclassified Deltaproteobacteria BinDmb119 organism-specific Integrated Microbial Genomes
2893488153: Unclassified Deltaproteobacteria bacterium S19_FULL_No.4_1.2_90 organism-specific Integrated Microbial Genomes
2814122916: unclassified Deltaproteobacteria BinDmb243 organism-specific Integrated Microbial Genomes
2619618919: Deltaproteobacterium EBPR_Bin_274 organism-specific Integrated Microbial Genomes
2616644868: Deltaproteobacteria SCGC AC-213-K20 (unscreened) organism-specific Integrated Microbial Genomes
2681812883: Deltaproteobacteria bacterium SAG AG-538-M06 organism-specific Integrated Microbial Genomes
2681812879: Deltaproteobacteria bacterium SAG AG-538-F03 organism-specific Integrated Microbial Genomes
2623620417: Deltaproteobacteria sp. genome_bin_29 organism-specific Integrated Microbial Genomes
2619618909: Deltaproteobacterium EBPR_Bin_372 organism-specific Integrated Microbial Genomes
2623620427: Deltaproteobacteria sp. genome_bin_42 organism-specific Integrated Microbial Genomes
2619618920: Deltaproteobacterium EBPR_Bin_345 organism-specific Integrated Microbial Genomes
2739367767: Unclassified Deltaproteobacteria DGG1A bin 11 organism-specific Integrated Microbial Genomes
2757320507: Unclassified Deltaproteobacterium bin95 organism-specific Integrated Microbial Genomes
2758568796: Unclassified Deltaproteobacteria Th196P3_bin21 organism-specific Integrated Microbial Genomes
2795385374: Uncultured Deltaproteobacteria bacterium SG1_66_5 organism-specific Integrated Microbial Genomes
Deltaproteobacteria taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Deltaproteobacteria taxonomy/phylogenetic Ocean Biogeographic Information System
Deltaproteobacteria taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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