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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 153 171 -
BioSample 5,323 5,575 -
GEO DataSets 52 702 -
Gene 15,435 15,437 -
Identical Protein Groups 319,502 325,487 -
Nucleotide 120,717 125,518 342
PubChem BioAssay 41 41 -
PMC 2,155 2,159 -
Protein 1,491,853 1,541,934 -
SRA 622 875 -
Structure 40 121 -
Taxonomy 32 32 -

Bacteroides ovatus

Taxonomy ID: 28116 (for references in articles please use ncbitaxon:28116)
current name
Bacteroides ovatus  Eggerth and Gagnon 1933 (Approved Lists 1980) in  in  [Skerman VBD et al. (1980)] , [Eggerth AH & Gagnon BH (1933)]
type strain of Bacteroides ovatus: ATCC : 8483 , BCRC : 10623 , CCUG : 4943 , CIP : 103756 , DSM : 1896 , JCM : 5824 , NCTC : 11153
includes:
bacterium NLAE-zl-H73
bacterium NLAE-zl-H59
bacterium NLAE-zl-H361
bacterium NLAE-zl-H304
bacterium NLAE-zl-C57
bacterium NLAE-zl-C500
bacterium NLAE-zl-C34
bacterium NLAE-zl-C11
homotypic synonym:
"Bacteroides fragilis subsp. ovatus"  (Eggerth and Gagnon 1933) Holdeman and Moore 1970 , effective name  1) in [Holdeman LV & Moore WEC (1970b)]
"Pasteurella ovata"  (Eggerth and Gagnon 1933) Prévot 1938 , effective name  2) in [Prévot AR (1938)]
"Pseudobacterium ovatum"  (Eggerth and Gagnon 1933) Krasil'nikov 1949 , effective name  3) in [Krasil'nikov NA (1949)]
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym Bacteroides koreensis  Shin et al. 2017 in [Shin Y et al. (2017)]
type strain of Bacteroides koreensis: personal : YS-aM39 , KCTC : 15520 , JCM : 31393
heterotypic synonym Bacteroides kribbi  Shin et al. 2017 in [Shin Y et al. (2017)]
type strain of Bacteroides kribbi: personal : R2F3-3-3 , KCTC : 15460 , JCM : 31391
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides

Notes:

Comments and References:

Holdeman LV & Moore WEC (1970b)
Prévot AR (1938)
Krasil'nikov NA (1949)
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Eggerth AH & Gagnon BH (1933) , doi: 10.1128/jb.25.4.389-413.1933 , Pubmed: abstract
Eggerth, A.H., and Gagnon, B.H. "The bacteroides of human feces." J. Bacteriol. (1933) 25(4):389-413.
Hahnke RL et al. (2016) , doi: 10.3389/fmicb.2016.02003 , Pubmed: abstract
Hahnke, R.L., Meier-Kolthoff, J.P., García-López, M., Mukherjee, S., Huntemann, M., Ivanova, N.N., Woyke, T., Kyrpides, N.C., Klenk, H.-P., and Göker, M. "Genome-based taxonomic classification of Bacteroidetes." Front. Microbiol. (2016) 7:2003.
List of Changes in Taxonomic Opinion No. 26 (2017) , Pubmed: abstract
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67(7):2081-2086.
Zaatout N et al. (2026) , Pubmed: abstract
Zaatout, N., Menasria, T., and Benhadj, M. "Comprehensive phylogenomic analyses support the reclassification of multiple Bacteroides species." Curr. Microbiol. ('2025' 2026) 83(2):96.
Shin Y et al. (2017) , Pubmed: abstract
Shin, Y., Park, S.-J., Paek, J., Kim, J.-S., Rhee, M.-S., Kim, H., Kook, J.-K., and Chang, Y.-H. "Bacteroides koreensis sp. nov. and Bacteroides kribbi sp. nov., two new members of the genus Bacteroides." Int. J. Syst. Evol. Microbiol. (2017) 67(11):4352-4357.
Shin Y et al. (2017) , Pubmed: abstract
Shin, Y., Park, S.-J., Paek, J., Kim, J.-S., Rhee, M.-S., Kim, H., Kook, J.-K., and Chang, Y.-H. "Bacteroides koreensis sp. nov. and Bacteroides kribbi sp. nov., two new members of the genus Bacteroides." Int. J. Syst. Evol. Microbiol. (2017) 67(11):4352-4357.
Cato EP & Johnson JL (1976)
Cato, E.P., and Johnson, J.L. "Reinstatement of species rank for Bacteroides fragilis, B. ovatus, B. distasonis, B. thetaiotaomicron, and B. vulgatus: Designation of neotype strains for Bacteroides fragilis (Veillon and Zuber) Castellani and Chalmers and Bacteroides thetaiotaomicron (Distaso) Castellani and Chalmers." Int. J. Syst. Bacteriol. (1976) 26(2):230-237. [No PubMed record available.]
List of Changes in Taxonomic Opinion No. 43 (2026)
Oren, A., and Göker, M. "Notification of changes in taxonomic opinion previously published outside the IJSEM: List of Changes in Taxonomic Opinion no. 43." Int. J. Syst. Evol. Microbiol. (2026) 76(1):006976. [N.B.: pro synon. notification]
Yang AI et al. (2025)
Yang, A.-I., Kim, B., Kang, W., Joe, H.-I., and Shin, N.-R. "Bacteroides celer sp. nov. and Bacteroides mucinivorans sp. nov., isolated from human feces, and the reclassification of Bacteroides koreensis Shin et al. 2017 and Bacteroides kribbi Shin et al. 2017 as later heterotypic synonyms of Bacteroides ovatus Eggerth and Gagnon 1933 (Approved Lists 1980)." J. Microbiol. (2025) 63(6):e2502006.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Bacteroides ovatus type strain (BD-ID 1592) meta-databases BacDive
Bacteroides kribbi type strain (BD-ID 158671) meta-databases BacDive
Bacteroides koreensis type strain (BD-ID 158670) meta-databases BacDive
Bacteroides ovatus KLE1656 organism-specific BioCyc
Bacteroides ovatus KLE1656 organism-specific BioCyc
Bacteroides ovatus KLE1656 organism-specific BioCyc
Bacteroides ovatus Eggerth and Gagnon 1933 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD: 111 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Bacteroides ovatus culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
8020396120: Bacteroides ovatus ATCC 8483 organism-specific Integrated Microbial Genomes
2938088584: Bacteroides ovatus AF04-17 organism-specific Integrated Microbial Genomes
2965289359: Bacteroides ovatus TM07-20 organism-specific Integrated Microbial Genomes
8020423805: Bacteroides ovatus AF45-17BH organism-specific Integrated Microbial Genomes
8020389717: Bacteroides ovatus AM54-35XD organism-specific Integrated Microbial Genomes
2958444783: Bacteroides ovatus AF24-28LB organism-specific Integrated Microbial Genomes
2924862757: Bacteroides ovatus KLE1656 organism-specific Integrated Microbial Genomes
2978280631: Bacteroides ovatus AM17-48 organism-specific Integrated Microbial Genomes
8017834413: Bacteroides ovatus OF01-19AC organism-specific Integrated Microbial Genomes
8020407005: Bacteroides ovatus AF27-16BH organism-specific Integrated Microbial Genomes
2970931087: Bacteroides ovatus AF04-46 organism-specific Integrated Microbial Genomes
8020379110: Bacteroides ovatus AF26-20AA organism-specific Integrated Microbial Genomes
8020373680: Bacteroides ovatus AM40-4 organism-specific Integrated Microbial Genomes
2988039093: Bacteroides ovatus AM14-26 organism-specific Integrated Microbial Genomes
8017829034: Bacteroides ovatus NCTC 11153 organism-specific Integrated Microbial Genomes
3004614178: Bacteroides ovatus 2789STDY5834943 organism-specific Integrated Microbial Genomes
8004965177: Bacteroides ovatus AM14-35 organism-specific Integrated Microbial Genomes
8020401580: Bacteroides ovatus AF29-12 organism-specific Integrated Microbial Genomes
8004881217: Bacteroides ovatus AM14-40 organism-specific Integrated Microbial Genomes
8020384330: Bacteroides ovatus OF05-12AC organism-specific Integrated Microbial Genomes
2519103196: Bacteroides ovatus NLAE-zl-H59 organism-specific Integrated Microbial Genomes
2515154064: Bacteroides ovatus NLAE-zl-H304 organism-specific Integrated Microbial Genomes
2513020027: Bacteroides ovatus NLAE-zl-C34 organism-specific Integrated Microbial Genomes
2654588146: Bacteroides ovatus NLAE-zl-C57 organism-specific Integrated Microbial Genomes
2693429857: Bacteroides ovatus DSM 1896 organism-specific Integrated Microbial Genomes
2513020023: Bacteroides ovatus NLAE-zl-C11 organism-specific Integrated Microbial Genomes
2657245482: Bacteroides ovatus CL09T03C03 organism-specific Integrated Microbial Genomes
2654588143: Bacteroides ovatus NLAE-zl-C500 organism-specific Integrated Microbial Genomes
2519103197: Bacteroides ovatus NLAE-zl-H73 organism-specific Integrated Microbial Genomes
2515154065: Bacteroides ovatus NLAE-zl-H361 organism-specific Integrated Microbial Genomes
2961349890: Bacteroides ovatus AF14-13AC organism-specific Integrated Microbial Genomes
8020412607: Bacteroides ovatus AM30-13 organism-specific Integrated Microbial Genomes
2922335181: Bacteroides ovatus AM50-10BH organism-specific Integrated Microbial Genomes
8017845142: Bacteroides ovatus AM32-14LB organism-specific Integrated Microbial Genomes
8020418118: Bacteroides ovatus AF20-9LB organism-specific Integrated Microbial Genomes
2965259118: Bacteroides ovatus AF42-23 organism-specific Integrated Microbial Genomes
8017839799: Bacteroides ovatus An161 organism-specific Integrated Microbial Genomes
Bacteroides ovatus | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Bacteroides ovatus type strain (SI-ID 92789) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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