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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 31 31 -
BioSample 177 177 -
GEO DataSets 130 130 -
Gene 6,461 6,475 -
Identical Protein Groups 5,652 5,652 -
Nucleotide 597 597 333
PubChem BioAssay 2 2 -
Protein 17,648 17,648 -
SRA 147 147 -
Structure 223 223 -
Taxonomy 1 1 -

Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

Taxonomy ID: 243230 (for references in articles please use ncbitaxon:243230)
current name
Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539
equivalent:
Deinococcus radiodurans ATCC 13939 , co-identical strain  1)
Deinococcus radiodurans DSM 20539 , co-identical strain  2)
Deinococcus radiodurans R1 , co-identical strain  3)
NCBI BLAST name: bacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales; Deinococcaceae; Deinococcus; Deinococcus radiodurans

Notes:

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Jeong S et al. (2024)
Jeong, S., Singh, H., Jung, J.,-H. Jung, K.-W., Ryu, S., and Lim, S. "Comparative genomics of Deinococcus radiodurans: unveiling genetic discrepancies between ATCC 13939K and BAA-816 strains." Front. Microbiol. (2024) 15:1410024.
White O et al. (1999)
White, O., Eisen, J.A., Heidelberg, J.F., Hickey, E.K., Peterson, J.D., Dodson, R.J., Haft, D.H., Gwinn, M.L., Nelson, W.C., Richardson, D.L., Moffat, K.S., Qin, H., Jiang, L., Pamphile, W., Crosby, M., Shen, M., Vamathevan, J.J., Lam, P., McDonald, L., Utterback, T., Zalewski, C., Makarova, K.S., Aravind, L., Daly, M.J., Minton, K.W., Fleischmann, R.D., Ketchum, K.A., Nelson, K.E., Salzberg, S., Smith, H.O., Venter, J.C., and Fraser, C.M. "Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1." Science (1999) 286(5444):1571-1577.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Deinococcus radiodurans type strain (BD-ID 3852) meta-databases BacDive
Deinococcus radiodurans R1 organism-specific BioCyc
Deinococcus radiodurans R1 organism-specific BioCyc
Deinococcus radiodurans R1 organism-specific BioCyc
GOLD: 2 Organisms organism-specific Genomes On Line Database
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
2687453506: Deinococcus radiodurans R1 organism-specific Integrated Microbial Genomes
637000092: Deinococcus radiodurans ATCC BAA-816 organism-specific Integrated Microbial Genomes
8002993038: Deinococcus radiodurans R1 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Deinococcus radiodurans type strain (SI-ID 2154) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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