Taxonomy browser Taxonomy Browser (Pseudomonas syringae pv. tomato str. DC3000)

Entrez records
Database name	Direct links	Subtree links	Links from type
BioProject	122	122	-
BioSample	352	352	-
GEO DataSets	343	343	-
Gene	6,614	6,614	-
Identical Protein Groups	6,561	6,561	-
Nucleotide	469	469	14
PubChem BioAssay	1	1	-
Protein	12,220	12,220	-
SRA	356	356	-
Structure	50	50	-
Taxonomy	1	1	-

Pseudomonas syringae pv. tomato str. DC3000

Taxonomy ID: 223283 (for references in articles please use NCBI:txid223283)

current name

Pseudomonas syringae pv. tomato str. DC3000

equivalent:

Pseudomonas syringae pv. tomato DC3000

Pseudomonas syringae DC3000

NCBI BLAST name: g-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym Pseudomonas syringae pv. tomato str. ATCC BAA-871

Lineage(full): cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 3; Pseudomonas syringae pv. tomato

Comments and References:

genome sequence

Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Buell CR et al. (2003)

Buell, C.R., Joardar, V., Lindeberg, M., Selengut, J., Paulsen, I.T., Gwinn, M.L., Dodson, R.J., Deboy, R.T., Durkin, A.S., Kolonay, J.F., Madupu, R., Daugherty, S., Brinkac, L., Beanan, M.J., Haft, D.H., Nelson, W.C., Davidsen, T., Zafar, N., Zhou, L., Liu, J., Yuan, Q., Khouri, H., Fedorova, N., Tran, B., Russell, D., Berry, K., Utterback, T., Van Aken, S.E., Feldblyum, T.V., D'Ascenzo, M., Deng, W.L., Ramos, A.R., Alfano, J.R., Cartinhour, S., Chatterjee, A.K., Delaney, T.P., Lazarowitz, S.G., Martin, G.B., Schneider, D.J., Tang, X., Bender, C.L., White, O., Fraser, C.M., and Collmer, A. "The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000." Proc. Natl. Acad. Sci. USA (2003) 100:10181-10186. Published online 19 August 2003: DOI 10.1073/pnas.1731982100

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
GOLD: Go0000618	organism-specific	Genomes On Line Database
2508501074: Pseudomonas syringae pv. tomato DC3000	organism-specific	Integrated Microbial Genomes
OMA	taxonomy/phylogenetic	OMA Browser: Orthologous MAtrix

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A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.