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Taxonomy browser (Pseudomonas protegens Pf-5)

Pseudomonas protegens Pf-5

Taxonomy ID: 220664 (for references in articles please use NCBI:txid220664)
current name
Pseudomonas protegens Pf-5
equivalent:
Pseudomonas protegens strain Pf-5
NCBI BLAST name: g-proteobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Pseudomonas fluorescens Pf-5
heterotypic synonym
Pseudomonas sp. Pf-5
equivalent:
Pseudomonas protegens str. Pf-5
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas chlororaphis group; Pseudomonas protegens
   Entrez records   
Database name Direct links
Nucleotide 336
Protein 8,375
Structure 89
Genome 1
Popset 10
GEO Datasets 60
Gene 6,642
SRA Experiments 114
Identical Protein Groups 6,921
BioProject 51
BioSample 145
Assembly 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Paulsen IT et al. (2005)
Paulsen, I.T., Press, C.M., Ravel, J., Kobayashi, D.Y., Myers, G.S., Mavrodi, D.V., DeBoy, R.T., Seshadri, R., Ren, Q., Madupu, R., Dodson, R.J., Durkin, A.S., Brinkac, L.M., Daugherty, S.C., Sullivan, S.A., Rosovitz, M.J., Gwinn, M.L., Zhou, L., Schneider, D.J., Cartinhour, S.W., Nelson, W.C., Weidman, J., Watkins, K., Tran, K., Khouri, H., Pierson, E.A., Pierson, L.S. 3rd, Thomashow, L.S., and Loper, J.E. "Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5." Nat. Biotechnol. (2005) 23:873-878. [Erratum: Nat. Biotechnol. (2006) 24:466.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider organism-specific BioCyc
GOLD: Go0000479 organism-specific Genomes On Line Database
637000220: Pseudomonas protegens Pf-5 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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