Link to NCBI Front Page Taxonomy Logo

Try the New NCBI Taxonomy Pages!
Explore our redesigned taxonomy browser and taxonomy record pages with faster, more intuitive search, taxonomy images, and links to NCBI Datasets and other data available at NCBI.

Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 10 10 -
BioSample 26 26 -
GEO DataSets 34 34 -
Gene 4,763 4,763 -
Identical Protein Groups 5,024 5,024 -
Nucleotide 810 810 -
PMC 5 5 -
Protein 10,626 10,626 -
SRA 27 27 -
Structure 34 34 -
Taxonomy 1 1 -

Pectobacterium atrosepticum SCRI1043

Taxonomy ID: 218491 (for references in articles please use NCBI:txid218491)
current name
Pectobacterium atrosepticum SCRI1043
equivalent:
Pectobacterium atrosepticum str. SCRI1043
Pectobacterium atrosepticum strain SCRI1043
NCBI BLAST name: enterobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym Erwinia carotovora subsp. atroseptica SCRI1043
heterotypic synonym Pectobacterium carotovora subsp. atroseptica str. SCRI1043
heterotypic synonym Pectobacterium carotovora subsp. atroseptica SCRI1043
heterotypic synonym Erwinia carotovora subsp. atroseptica str. SCRI1043
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium; Pectobacterium atrosepticum

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Bell KS et al. (2004)
Bell, K.S., Sebaihia, M., Pritchard, L., Holden, M.T., Hyman, L.J., Holeva, M.C., Thomson, N.R., Bentley, S.D., Churcher, L.J., Mungall, K., Atkin, R., Bason, N., Brooks, K., Chillingworth, T., Clark, K., Doggett, J., Fraser, A., Hance, Z., Hauser, H., Jagels, K., Moule, S., Norbertczak, H., Ormond, D., Price, C., Quail, M.A., Sanders, M., Walker, D., Whitehead, S., Salmond, G.P., Birch, P.R., Parkhill, J., and Toth, I.K. "Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors." Proc. Natl. Acad. Sci. U.S.A. (2004) 101:11105-11110.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pectobacterium atrosepticum type strain (BD-ID 5018) meta-databases BacDive
Pectobacterium atrosepticum SCRI1043 organism-specific BioCyc
Pectobacterium atrosepticum SCRI1043 organism-specific BioCyc
Pectobacterium atrosepticum SCRI1043 organism-specific BioCyc
GOLD: Go0000561 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
637000102: Pectobacterium atrosepticum SCRI1043 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Pectobacterium atrosepticum type strain (SI-ID 2463) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


Comments and questions to info@ncbi.nlm.nih.gov

[Help] [Search] [NLM NIH] [Disclaimer]