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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 12 12 -
BioSample 32 32 -
GEO DataSets 17 17 -
Gene 5,046 5,046 -
Identical Protein Groups 11,503 11,503 -
Nucleotide 41 41 -
PubChem BioAssay 1 1 -
PMC 189 189 -
Protein 17,439 17,439 -
SRA 30 30 -
Structure 15 15 -
Taxonomy 1 1 -

Escherichia coli 042

Taxonomy ID: 216592 (for references in articles please use NCBI:txid216592)
current name
Escherichia coli 042
equivalent:
Escherichia coli str. 042
NCBI BLAST name: enterobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym EAEC 042
heterotypic synonym enteroaggregative Escherichia coli strain 042
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli O44:H18

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Chaudhuri RR et al. (2010)
Chaudhuri, R.R., Sebaihia, M., Hobman, J.L., Webber, M.A., Leyton, D.L., Goldberg, M.D., Cunningham, A.F., Scott-Tucker, A., Ferguson, P.R., Thomas, C.M., Frankel, G., Tang, C.M., Dudley, E.G., Roberts, I.S., Rasko, D.A., Pallen, M.J., Parkhill, J., Nataro, J.P., Thomson, N.R., and Henderson, I.R. "Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative Escherichia coli strain 042." PLoS One (2010) 5:e8801.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Escherichia coli type strain (BD-ID 4907) meta-databases BacDive
Escherichia coli 042 organism-specific BioCyc
Escherichia coli 042 organism-specific BioCyc
Escherichia coli 042 organism-specific BioCyc
GOLD: 2 Organisms organism-specific Genomes On Line Database
646862322: Escherichia coli O44:H18 042 (EAEC) organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Escherichia coli type strain (SI-ID 14277) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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