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Taxonomy browser (Shewanella colwelliana)

Shewanella colwelliana

Taxonomy ID: 23 (for references in articles please use NCBI:txid23)
current name
Shewanella colwelliana (Weiner et al. 1988) Coyne et al. 1990 in [Validation List No. 34 (1990)]
homotypic synonym:
"Shewanella colwelliana" (Weiner et al. 1988) Coyne et al. 1989, effective name
Shewanella colwelliana (Weiner et al. 1988) Coyne et al. 1990 emend. Thorell et al. 2019, emended name
basionym:
Alteromonas colwelliana Weiner et al. 1988
type strain of Alteromonas colwelliana: ATCC:39565, personal::LST-W
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Shewanella affinis Ivanova et al. 2004
type strain of Shewanella affinis: CIP:107703, KMM:3587, ATCC:BAA-642
includes:
Shewanella sp. KMM 3587
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 1,763 1,630 136
Protein 26,904 26,902 -
Genome 1 1 -
Popset 10 10 -
PubMed Central 59 59 -
SRA Experiments 4 3 -
Protein Clusters 1 1 -
Identical Protein Groups 16,716 16,710 -
BioProject 4 3 -
BioSample 6 5 2
Assembly 6 5 1
Taxonomy 2 1 -

Comments and References:
Validation List No. 34 (1990)
VALIDATION LIST No. 34. Int. J. Syst. Bacteriol. (1990) 40(3):320-321.
Coyne VE et al. (1989)
Coyne, V.E., Pillidge, C.J., Sledjeski, D.D., Hori, H., Ortiz-Conde, B.A., Muir, D.G., Weiner, R.M., and Colwell, R.R. "Reclassification of Alteromonas colwelliana to the genus Shewanella by DNA-DNA hybridization, serology and 5S ribosomal RNA sequence data." Syst. Appl. Microbiol. (1989) 12:275-279. [No PubMed record available.]
Ivanova EP et al. (2004e)
Ivanova, E.P., Nedashkovskaya, O.I., Sawabe, T., Zhukova, N.V., Frolova, G.M., Nicolau, D.V., Mikhailov, V.V., and Bowman, J.P. "Shewanella affinis sp. nov., isolated from marine invertebrates." Int. J. Syst. Evol. Microbiol. (2004) 54:1089-1093. Published online 19 December 2003: DOI 10.1099/ijs.0.02992-0
Satomi M et al. (2007)
Satomi, M., Vogel, B.F., Venkateswaran, K., and Gram, L. "Description of Shewanella glacialipiscicola sp. nov. and Shewanella algidipiscicola sp. nov., isolated from marine fish of the Danish Baltic Sea, and proposal that Shewanella affinis is a later heterotypic synonym of Shewanella colwelliana." Int. J. Syst. Evol. Microbiol. (2007) 57:347-352.
Thorell K et al. (2019)
Thorell, K., Meier-Kolthoff, J.P., Sjöling, Å, and Martín-Rodríguez, A.J. "Whole-genome sequencing redefines Shewanella taxonomy." Front. Microbiol. (2019) 10:1861.
Weiner RM et al. (1988)
Weiner, R.M., Coyne, V.E., Brayton, P., West, P., and Raiken, S.F. "Alteromonas colwelliana sp. nov., an isolate from oyster habitats." Int. J. Syst. Bacteriol. (1988) 38:240-244. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Shewanella colwelliana meta-databases BacDive
Shewanella colwelliana (Weiner et al. 1988) Coyne et al. 1990 taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0356709 organism-specific Genomes On Line Database
Shewanella colwelliana culture/stock collections Global Catalogue of Microorganisms
2 records from this provider organism-specific Integrated Microbial Genomes
2 records from this provider taxonomy/phylogenetic Ocean Biogeographic Information System
2 records from provider taxonomy/phylogenetic World Register of Marine Species
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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