Taxonomy browser Taxonomy Browser (Synechococcus sp. PCC 6312)

Entrez records
Database name	Direct links	Subtree links	Links from type
BioProject	2	2	-
BioSample	1	1	-
Gene	3,795	3,795	-
Identical Protein Groups	4,052	4,052	-
Nucleotide	7	7	-
Protein	7,167	7,167	-
SRA	1	1	-
Taxonomy	1	1	-

Synechococcus sp. PCC 6312

Taxonomy ID: 195253 (for references in articles please use ncbitaxon:195253)

current name

Synechococcus sp. PCC 6312

equivalent:

Synechococcus sp. ATCC 27167 , co-identical strain¹⁾

Stenotopis californii PCC 6312 , nom. inval.²⁾ in [Salazar VW et al. (2020)]

NCBI BLAST name: cyanobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage(full): cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae; Synechococcus; unclassified Synechococcus

Notes:

1) Co-identical strain: these strains are derived from the same original isolate
2) 'Nom. inval.' (= nomen invalidum, = invalid name) refers to a name not published in accordance with rules enumerated in the International Code for algae, fungi and plants.

Comments and References:

Salazar VW et al. (2020) , Pubmed: abstract

Salazar, V.W., Tschoeke, D.A., Swings, J., Cosenza, C.A., Mattoso, M., Thompson, C.C., and Thompson, F.L. "A new genomic taxonomy system for the Synechococcus collective." Environ. Microbiol. (2020) 22(11):4557-4570.

genome sequence

Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Shih PM et al. (2013)

Shih, P.M., Wu, D., Latifi, A., Axen, S.D., Fewer, D.P., Talla, E., Calteau, A., Cai, F., Tandeau de Marsac, N., Rippka, R., Herdman, M., Sivonen, K., Coursin, T., Laurent, T., Goodwin, L., Nolan, M., Davenport, K.W., Han, C.S., Rubin, E.M., Eisen, J.A., Woyke, T., Gugger, M., and Kerfeld, C.A. "Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing." Proc. Natl. Acad. Sci. USA (2013) 110:1053-1058.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Synechococcus sp. PCC 6312 PCC 6312	organism-specific	BioCyc
Synechococcus sp. PCC 6312 PCC 6312	organism-specific	BioCyc
Synechococcus sp. PCC 6312 PCC 6312	organism-specific	BioCyc
GOLD: Go0006734	organism-specific	Genomes On Line Database
2509276030: Synechococcus sp. PCC 6312	organism-specific	Integrated Microbial Genomes
OMA	taxonomy/phylogenetic	OMA Browser: Orthologous MAtrix

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A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.