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Taxonomy browser (Clostridium perfringens ATCC 13124)

Clostridium perfringens ATCC 13124

Taxonomy ID: 195103 (for references in articles please use NCBI:txid195103)
current name
Clostridium perfringens ATCC 13124
Clostridium perfringens str. ATCC 13124
Clostridium perfringens strain ATCC 13124
NCBI BLAST name: firmicutes
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( abbreviated )
Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium
   Entrez records   
Database name Direct links Links from type
Nucleotide 40 13
Protein 3,387 -
Structure 52 -
Genome 1 -
Popset 1 -
GEO Datasets 4 -
PubMed Central 18 -
Gene 6,046 -
SRA Experiments 436 -
Identical Protein Groups 3,106 -
BioProject 9 -
BioSample 416 3
Assembly 1 1
PubChem BioAssay 3 -
Taxonomy 1 -

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Myers GS et al. (2006)
Myers, G.S., Rasko, D.A., Cheung, J.K., Ravel, J., Seshadri, R., DeBoy, R.T., Ren, Q., Varga, J., Awad, M.M., Brinkac, L.M., Daugherty, S.C., Haft, D.H., Dodson, R.J., Madupu, R., Nelson, W.C., Rosovitz, M.J., Sullivan, S.A., Khouri, H., Dimitrov, G.I., Watkins, K.L., Mulligan, S., Benton, J., Radune, D., Fisher, D.J., Atkins, H.S., Hiscox, T., Jost, B.H., Billington, S.J., Songer, J.G., McClane, B.A., Titball, R.W., Rood, J.I., Melville, S.B., and Paulsen, I.T. "Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Genome Res. (2006) 16:1031-1040.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Clostridium perfringens S107 meta-databases BacDive
Clostridium perfringens ATCC 13124 organism-specific BioCyc
GOLD: Go0000322 organism-specific Genomes On Line Database
637000077: Clostridium perfringens ATCC 13124 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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