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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 20 7,603 -
BioSample 94 779,184 -
Conserved Domains 32 196 -
GEO DataSets 42 5,248 -
Gene - 1,595,898 -
GTR - 1 -
Identical Protein Groups 141,713 43,801,783 -
Nucleotide - 7,620,258 117,345
PubChem BioAssay - 2,142 -
PMC 15,179 136,508 -
Protein 142,102 34,330,462 -
SRA 90 62,422 -
Structure 2 2,737 -
Taxonomy 13,495 13,495 -

Clostridia

Taxonomy ID: 186801 (for references in articles please use ncbitaxon:186801)
current name
Clostridia  Rainey 2010 in [Validation List No. 132 (2010)]
homotypic synonym:
"Clostridia"  Rainey 2009 , effective name  1) in [Rainey FA (2009)]
NCBI BLAST name: firmicutes
Rank: class
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Bacillati; Bacillota

Notes:

Comments and References:

Validation List No. 132 (2010)
Validation List No. 132: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2010) 60(3):469-472.
Rainey FA (2009)
Cruz-Morales P et al. (2019)
Cruz-Morales, P., Orellana, C.A., Moutafis, G., Moonen, G., Rincon, G., Nielsen, L.K., and Marcellin, E. "Revisiting the evolution and taxonomy of Clostridia, a phylogenomic update." Genome Biol. Evol. (2019) 11:2035-2044.
Kunisawa T (2015)
Kunisawa, T. "Evolutionary relationships of completely sequenced Clostridia species and close relatives." Int. J. Syst. Evol. Microbiol. (2015) 65:4276-4283.
Sorokin DY et al. (2021)
Sorokin, D.Y., Diender, M., Merkel, A.Y., Koenen, M., Bale, N.J., Pabst, M., Sinninghe Damsté, J.S., and Sousa, D.Z. "Natranaerofaba carboxydovora gen. nov., sp. nov., an extremely haloalkaliphilic CO-utilizing acetogen from a hypersaline soda lake representing a novel deep phylogenetic lineage in the class 'Natranaerobiia'." Environ. Microbiol. (2021) 23(7):3460-3476.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Clostridia taxonomy/phylogenetic Encyclopedia of life
Clostridia taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Clostridia Rainey, 2010 taxonomy/phylogenetic Ocean Biogeographic Information System
Clostridia | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Clostridia Rainey, 2010 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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