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Taxonomy browser (Cryptococcus neoformans var. grubii)

Cryptococcus neoformans var. grubii

Taxonomy ID: 178876 (for references in articles please use NCBI:txid178876)
current name
Cryptococcus neoformans var. grubii
type material of Cryptococcus neoformans var. grubii: CBS:8710, NYSD:1649
homotypic synonym:
Filobasidiella neoformans serotype A
NCBI BLAST name: basidiomycetes
Rank: varietas
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic genbank synonym
Cryptococcus neoformans serotype A
heterotypic synonym
Cryptococcus neoformans A
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans
   Entrez records   
Database name Subtree links Direct links
Nucleotide 30,473 16,469
Protein 301,780 105,741
Structure 27 -
Genome 1 1
Popset 98 98
GEO Datasets 588 225
PubMed Central 23 23
Gene 8,379 40
SRA Experiments 1,615 1,040
Identical Protein Groups 80,993 41,119
Bio Project 328 48
Bio Sample 1,466 1,007
Assembly 52 23
Probe 29 23
PubChem BioAssay 78 43
Taxonomy 260 1

Comments and References:

Diaz et al. 2000
Diaz, M.R., Boekhout, T., Theelen, B., and Fell, J.A. 2000. Molecular sequences analyses of the intergenic spacer (IGS) associated with rDNA of the two pathogenic varieties of the pathogenic yeast, Cryptococcus neoformans. System. Appl. Microbiol. 23: 535-545.
Boekhout et al. 2001
Boekhout, T. et al. 2001. Hybrid genotypes in the pathogenic yeast Cryptococcus neoformans. Microbiology 147: 891-907.
Kwon-Chung et al. (2017), doi:10.1128/mSphere.00357-16
Kwon-Chung K.J. et al. 2017. The Case for Adopting the “Species Complex” Nomenclature for the Etiologic Agents of Cryptococcosis. mSphere.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
dryaddb supplemental materials Dryad Digital Repository
6 records from this provider organism-specific Genomes On Line Database
Cryptococcus neoformans var. grubii culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Cryptococcus neoformans var. grubii Franzot, Salkin & Casadevall 1999 taxonomy/phylogenetic Index Fungorum
Cryptococcus neoformans var. grubii Franzot et al. taxonomy/phylogenetic MycoBank
fungal-I (genome proposal) taxonomy/phylogenetic NHGRI genome proposal white papers
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
16 records from provider organism-specific diArk - a resource for eukaryotic genome research
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