Taxonomy browser (Mycobacterium tuberculosis)

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Taxonomy browser (Mycobacterium tuberculosis)

Mycobacterium tuberculosis

Taxonomy ID: 1773 (for references in articles please use NCBI:txid1773)

current name

Mycobacterium tuberculosis (Zopf 1883) Lehmann and Neumann 1896 (Approved Lists 1980) in [Skerman VBD et al. (1980)]

type strain of Mycobacterium tuberculosis: ATCC :27294, personal::H37Rv, NCTC :7416, ATCC :25618, ATCC :9360, CCUG :37357, CCUG :38148, CIP:104475, CIP:64.31, CNCTC:7301, NCTC :13144

basionym:

"Bacterium tuberculosis" Zopf 1883, effective name

homotypic synonym:

Mycobacterium tuberculosis (Zopf 1883) Lehmann and Neumann 1896 (Approved Lists 1980) emend. Riojas et al. 2018, emended name

homotypic synonym:

"Bacillus tuberculosis" (Zopf 1883) Klein 1884, effective name¹⁾

NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

"Mycobacterium tuberculosis typus humanus" Lehmann and Neumann 1907

heterotypic synonym

"Mycobacterium tuberculosis var. hominis" Bergey et al. 1934, effective name²⁾

Lineage( full ): cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	1,472,593	1,245,976	3,236
Protein	20,315,902	13,019,454	-
Structure	3,491	1,531	-
Conserved Domains	6	5	-
GEO Datasets	9,017	5,012	-
PubMed Central	92,276	87,346	-
Gene	127,633	1	-
SRA Experiments	262,753	233,393	-
GEO Profiles	22,220	16,198	-
Protein Clusters	2,880	2,880	-
Identical Protein Groups	837,268	777,042	-
BioProject	4,573	1,685	-
BioSample	271,626	243,334	5,100
Datasets Genome	8,278	6,224	-
PubChem BioAssay	12,189	11,199	-
Taxonomy	2,915	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).

Comments and References:

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.

Lehmann KB & Neumann R (1896)

Lehman, K.B., and Neumann, R. Atlas und Grundriss der Bakeriologie und Lehrbuch der speziellen bakteriologischen Diagnositk. 1st Ed., (1896) J.F. Lehmann, Munchen. [No PubMed record available.]

Riojas MA et al. (2018)

Riojas, M.A., McGough, K.J., Rider-Riojas, C.J., Rastogi, N., and Hazbon, M.H. "Phylogenomic analysis of the species of the Mycobacterium tuberculosis complex demonstrates that Mycobacterium africanum, Mycobacterium bovis, Mycobacterium caprae, Mycobacterium microti and Mycobacterium pinnipedii are later heterotypic synonyms of Mycobacterium tuberculosis." Int. J. Syst. Evol. Microbiol. (2018) 68:324-332.

Runyon EH et al. (1967)

Runyon, E.H., et al. "Mycobacterium tuberculosis, M. bovis and M. microti species descriptions." Zentralbl. Bakteriol., I Abt., Orig. (1967) 204:405-413. [No PubMed record available.]

Zopf W (1883)

Zopf, W.: Die Spaltpilze. Edward Trewendt, Breslau, 1883, pp. 1-100. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Mycobacterium tuberculosis	meta-databases	BacDive - Free access to bacterial information database
64 records from this provider	organism-specific	BioCyc
dryaddb	supplemental materials	Dryad Digital Repository - Access Curated Datasets
GOLD: 4381 Organisms	organism-specific	Genomes On Line Database
Mycobacterium tuberculosis	culture/stock collections	Global Catalogue of Microorganisms
Related Immune Epitope Information	gene/protein/disease-specific	Immune Epitope Database and Analysis Resource
741 records from this provider	organism-specific	Integrated Microbial Genomes
Mycobacterium tuberculosis	taxonomy/phylogenetic	Lifemap
TubercuList	taxonomy/phylogenetic	NCBI taxonomy bookmarks
OMA	taxonomy/phylogenetic	OMA Browser: Orthologous MAtrix
Mycobacterium tuberculosis (T) \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry
Bacillus tuberculosis	taxonomy/phylogenetic	Systematic Mycology and Microbiology Laboratory, Fungal Databases
Sanger	companies/research institutes	The Sanger Centre
Mycobacterium tuberculosis	taxonomy/phylogenetic	TreeBase
Wikipedia	taxonomy/phylogenetic	iPhylo

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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