Taxonomy browser Taxonomy Browser (Mycolicibacterium smegmatis)

Entrez records
Database name	Direct links	Subtree links	Links from type
BioProject	147	263	-
BioSample	971	2,506	-
Conserved Domains	-	1	-
GEO DataSets	675	1,067	-
Gene	20,178	34,015	-
Identical Protein Groups	31,049	33,901	-
Nucleotide	9,746	10,663	365
PubChem BioAssay	1,426	1,546	-
PMC	189	194	-
Protein	217,832	256,746	-
SRA	931	2,539	-
Structure	218	862	-
Taxonomy	12	12	-

Mycolicibacterium smegmatis

Taxonomy ID: 1772 (for references in articles please use ncbitaxon:1772)

current name

Mycolicibacterium smegmatis (Lehmann and Neumann 1899) Gupta et al. 2018 in in [Gupta RS et al. (2018)] , [Validation List No. 181 (2018)]

homotypic synonym:

"Bacterium smegmatis" (Trevisan 1889) Migula 1900 , effective name¹⁾

Mycobacterium smegmatis (Trevisan 1889) Lehmann and Neumann 1899 (Approved Lists 1980) in [Skerman VBD et al. (1980)]

type strain of Mycobacterium smegmatis: ATCC : 19420 , CCUG : 21002 , CCUG : 21815 , CIP : 104444 , DSM : 43756 , JCM : 5866 , JCM : 6386 , NCTC : 8159 , NRRL : B-14616 , VKM : Ac-1239

basionym:

"Bacillus smegmatis" Trevisan 1889 , effective name²⁾

"Mycobacterium paratuberculosis smegmatis" Bustinza 1951 , effective name³⁾

Mycobacterium smegmatis (Trevisan, 1889) Lehmann and Neumann 1899 emend. Nouioui et al. 2018 , emended name⁴⁾ in [Nouioui I et al. (2018c)]

NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage(full): cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycolicibacterium

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
4) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.

Comments and References:

Gupta RS et al. (2018) , doi: 10.3389/fmicb.2018.00067 , Pubmed: abstract

Gupta, R.S., Lo, B., and Son, J. "Phylogenomics and comparative genomic studies robustly support division of the genus Mycobacterium into an emended genus Mycobacterium and four novel genera." Front. Microbiol. (2018) 9:67. [Corrigendum: Front. Microbiol. (2019) 10:714. (PMID 31024493)]

Validation List No. 181 (2018) , Pubmed: abstract

Validation List No. 181: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2018) 68(5):1411-1417.

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.

Nouioui I et al. (2018c) , doi: 10.3389/fmicb.2018.02007 , Pubmed: abstract

Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.

Lehmann KB & Neumann R (1899)

Lehmann, K.B., and Neumann, R. Lehmann's Medizin, Handatlanten. X. Atlas und Grundriss der Bakteriologie und Lehrbuch der speziellen Bakteriologishcen Diagnostik. 2. Aufl. 1899. pp. 1-497. [No PubMed record available.]

Trevisan V (1889)

Trevisan, V. I generie e le specie della Batteriacee. (1889) Zanaboni and Gabuzzi, Milan, pp. 1-35. [No PubMed record available.]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

LinkOut	Subject	LinkOut Provider
Mycolicibacterium smegmatis serovar "not known" str. NCTC8159	organism-specific	BioCyc
Mycolicibacterium smegmatis serovar "not known" str. NCTC8159	organism-specific	BioCyc
Mycolicibacterium smegmatis serovar "not known" str. NCTC8159	organism-specific	BioCyc
Mycobacterium smegmatis (Trevisan 1889) Lehmann and Neumann 1899 (Approved Lists 1980)	taxonomy/phylogenetic	Encyclopedia of life
GOLD: 13 Organisms	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Mycobacterium smegmatis	culture/stock collections	Global Catalogue of Microorganisms
Related Immune Epitope Information	gene/protein/disease-specific	Immune Epitope Database and Analysis Resource
2657245626: Mycolicibacterium smegmatis NCTC8159	organism-specific	Integrated Microbial Genomes
2687453596: Mycolicibacterium smegmatis INHR1	organism-specific	Integrated Microbial Genomes
2684623232: Mycolicibacterium smegmatis INHR2	organism-specific	Integrated Microbial Genomes
2869177050: Mycolicibacterium smegmatis NCTC 7017	organism-specific	Integrated Microbial Genomes
8121769534: Mycolicibacterium smegmatis Jucho	organism-specific	Integrated Microbial Genomes
8117802130: Mycolicibacterium smegmatis ATCC 19420	organism-specific	Integrated Microbial Genomes
Mycobacterium smegmatis	taxonomy/phylogenetic	Lifemap
Mycolicibacterium smegmatis \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry
Wikipedia	taxonomy/phylogenetic	iPhylo

Mycolicibacterium smegmatis

Notes:

Comments and References:

External Information Resources (NCBI LinkOut)