Taxonomy browser (Mycobacterium avium subsp. paratuberculosis)

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Taxonomy browser (Mycobacterium avium subsp. paratuberculosis)

Mycobacterium avium subsp. paratuberculosis

Taxonomy ID: 1770 (for references in articles please use NCBI:txid1770)

current name

Mycobacterium avium subsp. paratuberculosis (Bergey et al. 1923) Thorel et al. 1990

basionym:

Mycobacterium paratuberculosis Bergey et al. 1923 (Approved Lists 1980) in [Skerman VBD et al. (1980)]

type strain of Mycobacterium paratuberculosis: ATCC :19698, CIP:103963, DSM :44133

homotypic synonym:

"Bacterium paratuberculosis" (Bergey et al. 1923) Miessner and Berge in Kolle and Wasserman 1929, effective name¹⁾

"Bacillus paratuberculosis" (Bergey et al. 1923) Krasil'nikov 1941, effective name²⁾

equivalent:

Mycobacterium avium paratuberculosis

NCBI BLAST name: high G+C Gram-positive bacteria
Rank: subspecies
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

"Darmtuberculose" Johne and Frothingham 1895, effective name³⁾

heterotypic synonym

"Mycobacterium enteritidis" Lehmann in Lehmann and Neumann 1927, effective name⁴⁾

heterotypic synonym

"Mycobacterium johnei" Francis 1943, effective name⁵⁾

Lineage( full ): cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC); Mycobacterium avium

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	63,420	30,841	2,251
Protein	836,523	784,174	-
Structure	27	15	-
GEO Datasets	123	83	-
PubMed Central	681	681	-
Gene	9,510	-	-
SRA Experiments	2,238	2,208	-
Identical Protein Groups	36,078	17,621	-
BioProject	98	62	-
BioSample	2,297	2,250	3
Datasets Genome	237	188	-
PubChem BioAssay	38	38	-
Taxonomy	31	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
4) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
5) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).

Comments and References:

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.

Thorel MF et al. (1990)

Thorel, M.F., Krichevsky, M., and Levy-Frebault, V.V. "Numerical taxonomy of mycobactin-dependent mycobacteria, emended description of Mycobacterium avium, and description of Mycobacterium avium subsp. avium subsp. nov., Mycobacterium avium subsp. paratuberculosis subsp. nov., and Mycobacterium avium subsp. silvaticum subsp. nov." Int. J. Syst. Bacteriol. (1990) 40:254-260.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Mycobacterium avium subsp. paratuberculosis	meta-databases	BacDive - Free access to bacterial information database
Mycobacterium avium subsp. paratuberculosis (Bergey et al. 1923) Thorel et al., 1990	taxonomy/phylogenetic	Encyclopedia of life
GOLD: 21 Organisms	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Mycobacterium avium subsp. paratuberculosis	culture/stock collections	Global Catalogue of Microorganisms
Related Immune Epitope Information	gene/protein/disease-specific	Immune Epitope Database and Analysis Resource
11 records from this provider	organism-specific	Integrated Microbial Genomes
Mycobacterium avium subsp. paratuberculosis \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry
Wikipedia	taxonomy/phylogenetic	iPhylo

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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