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Taxonomy browser (Staphylococcus epidermidis ATCC 12228)

Staphylococcus epidermidis ATCC 12228

Taxonomy ID: 176280 (for references in articles please use NCBI:txid176280)
current name
Staphylococcus epidermidis ATCC 12228
NCBI BLAST name: firmicutes
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus epidermidis
   Entrez records   
Database name Direct links
Nucleotide 546
Protein 6,436
Structure 27
Genome 1
GEO Datasets 51
PubMed Central 54
Gene 2,679
SRA Experiments 29
GEO Profiles 46,030
Identical Protein Groups 3,989
BioProject 8
BioSample 33
Assembly 3
PubChem BioAssay 168
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
MacLea KS &Trachtenberg AM (2017)
MacLea, K.S., and Trachtenberg, A.M. "Complete genome sequence of Staphylococcus epidermidis ATCC 12228 chromosome and plasmids, generated by long-read sequencing." Genome Announc. (2017) 5:e00954-17.
Zhang YQ et al. (2003)
Zhang, Y.-Q., Ren, S.-X., Li, H.-L., Wang, Y.-X., Fu, G., Yang, J., Qin, Z.-Q., Miao, Y.-G., Wang, W.-Y., Chen, R.-S., Shen, Y., Chen, Z., Yuan, Z.-H., Zhao, G.-P., Qu, D., Danchin, A., and Wen, Y.-M. "Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC 12228)." Mol. Microbiol. (2003) 49:1577-1593. Published online 11 August 2003: doi:10.1046/j.1365-2958.2003.03671.x

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Staphylococcus epidermidis meta-databases BacDive
2 records from this provider organism-specific BioCyc
GOLD: Go0000659 organism-specific Genomes On Line Database
2 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
ATCC 12228 [3 3 297 5689 1 10] DE0527 [1 128]
culture-collection
ATCC:12228 [1 281 2440 1]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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