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Taxonomy browser (Bifidobacterium bifidum)

Bifidobacterium bifidum

Taxonomy ID: 1681 (for references in articles please use NCBI:txid1681)
current name
Bifidobacterium bifidum (Tissier 1900) Orla-Jensen 1924
type strain of Bifidobacterium bifidum: CGMCC:1.2212, ATCC:29521, BCRC:14615, CCUG:18364, CCUG:45217, CIP:56.7, DSM:20456, HAMBI:1380, IFO:14252, JCM:1255, BCCM/LMG:11041, BCCM/LMG:8810, NBRC:100015, NBRC:14252, NCFB:2715, NCIMB:702715, NCTC:13001, personal::Ti, KCTC:3202
homotypic synonym:
"Bacillus bifidus" Tissier 1900, effective name 1)
"Bacteroides bifidus" (Tissier 1900) Castellani and Chalmers 1919, effective name 2)
"Bacterium bifidum" (Tissier 1900) Lehmann and Neumann 1927, effective name 3)
"Tissieria bifida" (Tissier 1900) Pribram 1929, effective name 4)
"Nocardia bifida" (Tissier 1900) Vuillemin 1931, effective name 5)
"Actinomyces bifidus" (Tissier 1900) Nannizzi 1934, effective name 6)
"Actinobacterium bifidum" (Tissier 1900) Puntoni 1937, effective name 7)
"Bifidibacterium bifidum" (Tissier 1900) Prevot 1938, effective name 8)
"Cohnistreptothrix bifidus" (Tissier 1900) Negroni and Fischer 1944, effective name 9)
Bifidobacterium bifidum (Tissier 1900) Orla-Jensen 1924 emend. Nouioui et al. 2018, emended name 10) in [Nouioui I et al. (2018c)]
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Bacillus bifidus communis" Tissier 1900, effective name 11)
heterotypic synonym
"Lactobacillus bifidus type II" Weiss and Rettger 1938
heterotypic synonym
"Lactobacillus parabifidus" Weiss and Rettger 1938, effective name 12)
heterotypic synonym
"Actinomyces parabifidus" (Weiss and Rettger 1938) Pine and Georg 1965, effective name 13)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 17,203 14,541 280
Protein 220,736 197,894 -
Structure 26 15 -
Genome 2 1 -
Popset 47 47 -
GEO Datasets 81 56 -
PubMed Central 4,721 4,721 -
Gene 9,585 4 -
SRA Experiments 404 351 -
Protein Clusters 1,759 1,759 -
Identical Protein Groups 75,542 71,332 -
BioProject 133 115 -
BioSample 1,834 1,800 7
Assembly 365 349 -
PubChem BioAssay 16 16 -
Taxonomy 13 1 -

Notes:

Comments and References:

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
image:Bifidobacterium bifidum
Orla-Jensen S (1924)
Orla-Jensen, S. "La classificationdes des bacteries lactiques." Lait (1924) 4:468-474. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Tissier H (1900)
Tissier, H.: Recherches sur la flore intestinale normale et pathologique du nourrisson. Thèse, Paris, (1900). pp.1-253

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Bifidobacterium bifidum meta-databases BacDive
4 records from this provider organism-specific BioCyc
Bifidobacterium bifidum (Tissier 1900) Orla-Jensen 1924 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
9 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Bifidobacterium bifidum culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
66 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Bifidobacterium bifidum taxonomy/phylogenetic TreeBase
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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