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Taxonomy browser (Bifidobacterium)


Taxonomy ID: 1678 (for references in articles please use NCBI:txid1678)
current name
Bifidobacterium Orla-Jensen 1924
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Tissieria" Pribram 1929, effective name 1)
heterotypic synonym
"Bifidibacterium" PreĢvot 1938, effective name 1)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 339,890 48
Protein 4,171,282 66,242
Structure 198 2
Genome 110 1
Popset 323 247
Conserved Domains 6 5
GEO Datasets 1,015 50
PubMed Central 37,334 37,317
Gene 147,004 -
SRA Experiments 6,536 723
GEO Profiles 6,601 -
Protein Clusters 5,322 1,985
Identical Protein Groups 1,398,783 65,432
BioProject 1,136 64
BioSample 21,098 1,274
Assembly 5,654 -
PubChem BioAssay 130 8
Taxonomy 856 1


Comments and References:

Bifidobacterium (LPSN link)
Gavini F et al. (1991)
Gavini, F., Pourcher, A.M., Neut, C., Monget, D., Romond, C., Oger, C., and Izard, D. "Phenotypic differentiation of bifidobacteria of human and animal origins." Int. J. Syst. Bacteriol. (1991) 41:548-557.
Jian W et al. (2001)
Jian, W., Zhu, L., and Dong, X. "New approach to phylogenetic analysis of the genus Bifidobacterium based on partial HSP60 gene sequences." Int. J. Syst. Evol. Microbiol. (2001) 51:1633-1638.
Kim BJ et al. (2010)
Kim, B.J., Kim, H.-Y., Yun, Y.-J., Kim, B.-J., and Kook, Y.-H. "Differentiation of Bifidobacterium species using partial RNA polymerase {beta}-subunit (rpoB) gene sequences." Int. J. Syst. Evol. Microbiol. (2010) 60:2697-2704.
Leblond-Bourget N et al. (1996)
Leblond-Bourget, N., Philippe, H., Mangin, I., and Decaris, B. "16S rRNA and 16S to 23S internal transcribed spacer sequence analyses reveal inter- and intraspecific Bifidobacterium phylogeny." Int. J. Syst. Bacteriol. (1996) 46:102-111.
Orla-Jensen S (1924)
Orla-Jensen, S. "La classificationdes des bacteries lactiques." Lait (1924) 4:468-474. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Ventura M et al. (2006)
Ventura, M., Canchaya, C., Del Casale, A., Dellaglio, F., Neviani, E., Fitzgerald, G.F., and van Sinderen, D. "Analysis of bifidobacterial evolution using a multilocus approach." Int. J. Syst. Evol. Microbiol. (2006) 56:2783-2792.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Bifidobacterium taxonomy/phylogenetic Encyclopedia of life
2808606957: Bifidobacterium sp. ESL0447 organism-specific Integrated Microbial Genomes
Bifidobacterium taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Bifidobacterium Orla-Jensen, 1924 taxonomy/phylogenetic Ocean Biogeographic Information System
Bifidobacterium Orla-Jensen, 1924 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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