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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 106 113 -
BioSample 2,248 2,304 -
GEO DataSets 9 9 -
Gene 6,145 12,176 -
Identical Protein Groups 366,785 368,877 -
Nucleotide 107,314 108,858 274
PubChem BioAssay 1 1 -
PMC 8 8 -
Protein 336,129 347,346 -
SRA 542 598 -
Structure 16 20 -
Taxonomy 3 3 -

Segatella copri

Taxonomy ID: 165179 (for references in articles please use ncbitaxon:165179)
current name
Segatella copri  (Hayashi et al. 2007) Hitch et al. 2023 in  in  [Validation List No. 209 (2023)] , [Validation List No. 211 (2023)]
includes:
Prevotella sp. CB28
Prevotella sp. CB26
Prevotella sp. CB23
Prevotella sp. CB18
Prevotella sp. 'Indica Stool'
Prevotella sp. CB7
basionym:
Prevotella copri  Hayashi et al. 2007 in [Hayashi H et al. (2007)]
type strain of Prevotella copri: DSM : 18205 , JCM : 13464 , personal : CB7
not considered type of Prevotella copri: JCM : 14646
homotypic synonym:
Prevotella copri  Hayashi et al. 2007 emend. Hahnke et al. 2016 in [Hahnke RL et al. (2016)]
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Segatella

Comments and References:
Validation List No. 209 (2023) , Pubmed: abstract
Validation List no. 209: "Valid publication of new names and new combinations effectively published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2023) 73(1):005709.
Validation List No. 211 (2023) , Pubmed: abstract
Validation List no. 211. "Valid publication of new names and new combinations effectively published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2023) 73(5):005845.
Hitch TC et al. (2022) , Pubmed: abstract
Hitch, T.C., Bisdorf, K., Afrizal, A., Riedel, T., Overmann, J., Strowig, T., and Clavel, T. "A taxonomic note on the genus Prevotella: Description of four novel genera and emended description of the genera Hallella and Xylanibacter." Syst. Appl. Microbiol. (2022) 45(6):126354.
Hayashi H et al. (2007) , Pubmed: abstract
Hayashi, H., Shibata, K., Sakamoto, M., Tomita, S., and Benno, Y. "Prevotella copri sp. nov. and Prevotella stercorea sp. nov., isolated from human faeces." Int. J. Syst. Evol. Microbiol. (2007) 57(5):941-946.
Hahnke RL et al. (2016) , doi: 10.3389/fmicb.2016.02003 , Pubmed: abstract
Hahnke, R.L., Meier-Kolthoff, J.P., García-López, M., Mukherjee, S., Huntemann, M., Ivanova, N.N., Woyke, T., Kyrpides, N.C., Klenk, H.-P., and Göker, M. "Genome-based taxonomic classification of Bacteroidetes." Front. Microbiol. (2016) 7:2003.
List of Changes in Taxonomic Opinion No. 26 (2017)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67(7):2081-2086.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
GOLD: 52 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Prevotella copri culture/stock collections Global Catalogue of Microorganisms
2903605234: Prevotella copri AF38-11 organism-specific Integrated Microbial Genomes
8098751284: Segatella copri SG-805 organism-specific Integrated Microbial Genomes
2878921331: Prevotella copri AF22-1 organism-specific Integrated Microbial Genomes
2878930440: Prevotella copri AM16-54 organism-specific Integrated Microbial Genomes
2903627369: Prevotella copri AF43-2 organism-specific Integrated Microbial Genomes
2906441961: Prevotella copri AF11-14 organism-specific Integrated Microbial Genomes
8083498655: Segatella copri H-2489 organism-specific Integrated Microbial Genomes
8083494884: Segatella copri H-2497 organism-specific Integrated Microbial Genomes
8075990716: Prevotella copri HDE06 organism-specific Integrated Microbial Genomes
2906454065: Prevotella copri AM42-23AC organism-specific Integrated Microbial Genomes
8083505788: Segatella copri H-2383 organism-specific Integrated Microbial Genomes
8083502198: Segatella copri H-2477 organism-specific Integrated Microbial Genomes
8098747781: Segatella copri SG-1727 organism-specific Integrated Microbial Genomes
8098744036: Segatella copri SG-1969 organism-specific Integrated Microbial Genomes
2874479894: Prevotella copri OF03-3 organism-specific Integrated Microbial Genomes
2871871566: Prevotella copri AF24-12 organism-specific Integrated Microbial Genomes
2903548405: Prevotella copri AM22-1 organism-specific Integrated Microbial Genomes
2903667193: Prevotella copri OM06-11 organism-specific Integrated Microbial Genomes
2871875081: Prevotella copri AF15-25 organism-specific Integrated Microbial Genomes
2874484135: Prevotella copri AF29-19 organism-specific Integrated Microbial Genomes
2871894222: Prevotella copri AF10-17 organism-specific Integrated Microbial Genomes
2876643526: Prevotella copri AF12-50 organism-specific Integrated Microbial Genomes
2903620348: Prevotella copri TF06-40 organism-specific Integrated Microbial Genomes
2871884363: Prevotella copri AM22-2 organism-specific Integrated Microbial Genomes
2878936817: Prevotella copri OM04-1 organism-specific Integrated Microbial Genomes
2876631381: Prevotella copri AM22-19 organism-specific Integrated Microbial Genomes
2878915049: Prevotella copri AF46-2NS organism-specific Integrated Microbial Genomes
2871880916: Prevotella copri Indica organism-specific Integrated Microbial Genomes
Segatella copri (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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