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Taxonomy browser (Segatella copri)

Segatella copri

Taxonomy ID: 165179 (for references in articles please use NCBI:txid165179)
current name
Segatella copri (Hayashi et al. 2007) Hitch et al. 2023 in [Validation List No. 209 (2023), Validation List No. 211 (2023)]
homotypic synonym:
"Segatella copri" (Hayashi et al. 2007) Hitch et al. 2022, effective name in [Hitch TC et al. (2022)]
basionym:
Prevotella copri Hayashi et al. 2007 in [Hayashi H et al. (2007)]
type strain of Prevotella copri: DSM:18205, JCM:13464, personal::CB7
not considered type of Prevotella copri: JCM:14646
homotypic synonym:
Prevotella copri Hayashi et al. 2007 emend. Hahnke et al. 2016, emended name in [Hahnke RL et al. (2016)]
includes:
Prevotella sp. 'Indica Stool'
Prevotella sp. CB18
Prevotella sp. CB23
Prevotella sp. CB26
Prevotella sp. CB28
Prevotella sp. CB7
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Segatella
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 51,093 49,549 274
Protein 313,712 302,521 -
Structure 8 8 -
Genome 2 1 -
Popset 2 2 -
GEO Datasets 8 8 -
PubMed Central 153 152 -
Gene 12,156 6,145 -
SRA Experiments 359 315 -
Protein Clusters 1,641 1,641 -
Identical Protein Groups 267,519 265,270 -
BioProject 85 80 -
BioSample 1,178 1,134 42
Assembly 498 492 -
PubChem BioAssay 1 1 -
Taxonomy 3 1 -

Comments and References:

Validation List No. 209 (2023), PubMed: abstract
Validation List no. 209: "Valid publication of new names and new combinations effectively published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2023) 73(1):005709.
Validation List No. 211 (2023), PubMed: abstract
Validation List no. 211. "Valid publication of new names and new combinations effectively published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2023) 73(5):005845.
Hitch TC et al. (2022), PubMed: abstract
Hitch, T.C., Bisdorf, K., Afrizal, A., Riedel, T., Overmann, J., Strowig, T., and Clavel, T. "A taxonomic note on the genus Prevotella: Description of four novel genera and emended description of the genera Hallella and Xylanibacter." Syst. Appl. Microbiol. (2022) 45(6):126354.
Hayashi H et al. (2007), PubMed: abstract
Hayashi, H., Shibata, K., Sakamoto, M., Tomita, S., and Benno, Y. "Prevotella copri sp. nov. and Prevotella stercorea sp. nov., isolated from human faeces." Int. J. Syst. Evol. Microbiol. (2007) 57(5):941-946.
Hahnke RL et al. (2016), doi: 10.3389/fmicb.2016.02003, PubMed: abstract
Hahnke, R.L., Meier-Kolthoff, J.P., García-López, M., Mukherjee, S., Huntemann, M., Ivanova, N.N., Woyke, T., Kyrpides, N.C., Klenk, H.-P., and Göker, M. "Genome-based taxonomic classification of Bacteroidetes." Front. Microbiol. (2016) 7:2003.
List of Changes in Taxonomic Opinion No. 26 (2017)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67(7):2081-2086.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Prevotella copri meta-databases BacDive
GOLD Multi-Isolate Organism: Go0449802 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Prevotella copri culture/stock collections Global Catalogue of Microorganisms
26 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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