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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 10 12 -
BioSample 45 47 -
Gene 3,183 6,030 -
Identical Protein Groups 13,304 14,378 -
Nucleotide 556 1,317 4
PMC 231 231 -
Protein 45,012 48,166 -
SRA 17 19 -
Taxonomy 4 4 -

Treponema phagedenis

Taxonomy ID: 162 (for references in articles please use NCBI:txid162)
current name
Treponema phagedenis  (ex Brumpt 1922) Kuhnert et al. 2020 , nom. rev.  1) in  in  [Kuhnert P et al. (2020)] , [Brumpt E (1922)]
type strain of Treponema phagedenis: personal : B43.1 , DSM : 110455 , NCTC : 14362
homotypic synonym:
"Spirochaeta phagedenis"  Noguchi 1912 , effective name  2) in [Noguchi H (1912)]
"Treponema phagedenis"  (ex Brumpt 1922) Smibert 1984 , effective name  3) in  in  [Smibert RM (1984)] , [Brumpt E (1922)]
NCBI BLAST name: spirochetes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia; Spirochaetales; Treponemataceae; Treponema

Notes:

Comments and References:

Kuhnert P et al. (2020) , Pubmed: abstract
Kuhnert, P., Brodard, I., Alsaaod, M., Steiner, A., Stoffel, M.H., and Jores, J. "Treponema phagedenis (ex Noguchi 1912) Brumpt 1922 sp. nov., nom. rev., isolated from bovine digital dermatitis." Int. J. Syst. Evol. Microbiol. (2020) 70(3):2115-2123.
Brumpt E (1922)
Noguchi H (1912) , doi: 10.1084/jem.16.3.261 , Pubmed: abstract
Noguchi, H. "Pure cultivation of Spirochæta phagedenis (new species), a spiral organism found in phagedenic lesions on human external genitalia." J. Exp. Med. (1912) 16(3):261-268.
Smibert RM (1984)
Brumpt E (1922)

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
GOLD: 9 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2619619290: Treponema phagedenis V1 organism-specific Integrated Microbial Genomes
8003405563: Treponema phagedenis B43.1 organism-specific Integrated Microbial Genomes
Treponema phagedenis | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Treponema phagedenis type strain (SI-ID 397395) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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