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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 317 334 -
BioSample 1,614 1,632 -
GEO DataSets 67 67 -
Gene 10,200 15,802 -
Identical Protein Groups 163,315 166,276 -
Nucleotide 74,675 77,474 559
PubChem BioAssay 14 14 -
PMC 4,332 4,332 -
Protein 346,599 363,506 -
SRA 572 580 -
Structure 7 7 -
Taxonomy 13 13 -

Limosilactobacillus fermentum

Taxonomy ID: 1613 (for references in articles please use ncbitaxon:1613)
current name
Limosilactobacillus fermentum  (Beijerinck 1901) Zheng et al. 2020 in [Zheng J et al. (2020)]
basionym:
Lactobacillus fermentum  Beijerinck 1901 (Approved Lists 1980) emend. Dellaglio et al. 2004
type strain of Lactobacillus fermentum: ATCC : 14931 , CCUG : 30138 , CIP : 102980 , IFO : 15885 , BCCM/LMG : 6902 , NBRC : 15885 , NCCB : 46038 , NCDO : 1750 , NCIMB : 11840 , NRRL : B-4524 , DSM : 20052 , JCM : 1173
includes:
Lactobacillus sp. NCIM 2165
homotypic synonym:
"Lactobacterium fermentum"  (Beijerinck 1901) van Steenberge 1920 , effective name  1)
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym Lactobacillus cellobiosus  Rogosa et al. 1953 (Approved Lists 1980)
type strain of Lactobacillus cellobiosus Rogosa et al. 1953 (Approved Lists 1980): JCM : 1137 , CECT : 562 , BCCM/LMG : 9846 , DSM : 20055 , NRRL : B-1840 , JCM : 12530
heterotypic synonym "Bacillus d"  von Freudenreich 1895
heterotypic synonym "Bacillus casei d"  von Freudenreich and Thoni 1904
Lineage(full)
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Limosilactobacillus

Notes:

Comments and References:

Zheng J et al. (2020) , Pubmed: abstract
Zheng, J., Wittouck, S., Salvetti, E., Franz, C.M.A.P., Harris, H.M.B., Mattarelli, P., O'Toole, P.W., Pot, B., Vandamme, P., Walter, J., Watanabe, K., Wuyts, S., Felis, G.E., Gänzle, M.G., and Lebeer, S. "A taxonomic note on the genus description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae." Int. J. Syst. Evol. Microbiol. (2020) 70(4):2782-2858.
Lactobacillus cellobiosus = Lactobacillus fermentum?
The type strain of Lactobacillus cellobiosus (ATCC 11739 = CCRC 12194 = CECT 562 = CIP 102981 = DSM 20055 = LMG 9846 = NCFB 928 = JCM 1137 = HAMBI 68) is listed as Lactobacillus fermentum in the ATCC, CIP, DSMZ, and JCM catalogues of strains, and as Lactobacillus cellobiosus in the CECT, LMG, and HAMBI catalogues of strains.
Dellaglio F et al. (2004)
Dellaglio, F., Torriani, S., and Felis, G.E. "Reclassification of Lactobacillus cellobiosus Rogosa et al. 1953 as a later synonym of Lactobacillus fermentum Beijerinck 1901." Int. J. Syst. Evol. Microbiol. (2004) 54:809-812.
Falsen E et al. (1999) (reference with type strain information)
Falsen, E., Pascual, C., Sjödén, B., Ohlén, M., and Collins, M.D. "Phenotypic and phylogenetic characterization of a novel Lactobacillus species from human sources: description of Lactobacillus iners sp. nov." Int. J. Syst. Bacteriol. (1999) 49(1):217-221.
Rogosa M et al. (1953)
Rogosa, M. et al. "Species differentiation of oral lactobacilli from man including descriptions of Lactobacillus salivarius nov. spec. and Lactobacillus cellobiosus nov. spec." J. Bacteriol. (1953) 65:681-699. [No abstract available.]
Rogosa M & Hansen PA (1971)
Rogosa, M., and Hansen, P.A. "Nomenclatural considerations of certain species of Lactobacillus Beijerinck. Request for an opinion." Int. J. Syst. Bacteriol. (1971) 21:177-186. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30(1):225-420. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Limosilactobacillus fermentum type strain (BD-ID 6458) meta-databases BacDive
Limosilactobacillus fermentum LAB1 organism-specific BioCyc
Limosilactobacillus fermentum SNUV175 organism-specific BioCyc
Limosilactobacillus fermentum NBRC 3959 organism-specific BioCyc
Limosilactobacillus fermentum SK152 organism-specific BioCyc
Limosilactobacillus fermentum SRCM103285 organism-specific BioCyc
Limosilactobacillus fermentum LMT2-75 organism-specific BioCyc
Limosilactobacillus fermentum YL-11 organism-specific BioCyc
Limosilactobacillus fermentum SRCM 103290 organism-specific BioCyc
Lactobacillus fermentum YL-11 organism-specific BioCyc
Limosilactobacillus fermentum NBRC 3959 organism-specific BioCyc
Limosilactobacillus fermentum NCC2970 organism-specific BioCyc
Lactobacillus fermentum SRCM103285 organism-specific BioCyc
Lactobacillus fermentum LMT2-75 organism-specific BioCyc
Lactobacillus fermentum SK152 organism-specific BioCyc
Lactobacillus fermentum SRCM 103290 organism-specific BioCyc
Limosilactobacillus fermentum LAB1 organism-specific BioCyc
Limosilactobacillus fermentum SRCM103285 organism-specific BioCyc
Limosilactobacillus fermentum NBRC 3959 organism-specific BioCyc
Lactobacillus fermentum YL-11 organism-specific BioCyc
Limosilactobacillus fermentum SK152 organism-specific BioCyc
Limosilactobacillus fermentum NCC2970 organism-specific BioCyc
Limosilactobacillus fermentum LAB1 organism-specific BioCyc
Lactobacillus fermentum SRCM 103290 organism-specific BioCyc
Lactobacillus fermentum SK152 organism-specific BioCyc
Limosilactobacillus fermentum SNUV175 organism-specific BioCyc
Lactobacillus fermentum LMT2-75 organism-specific BioCyc
Limosilactobacillus fermentum LMT2-75 organism-specific BioCyc
Limosilactobacillus fermentum YL-11 organism-specific BioCyc
Limosilactobacillus fermentum NCC2970 organism-specific BioCyc
Limosilactobacillus fermentum SNUV175 organism-specific BioCyc
Limosilactobacillus fermentum SRCM 103290 organism-specific BioCyc
Lactobacillus fermentum SRCM103285 organism-specific BioCyc
Lactobacillus cellobiosus Rogosa et al. 1953 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD: 82 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Lactobacillus fermentum culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
2904272770: Limosilactobacillus fermentum SK152 organism-specific Integrated Microbial Genomes
2937157873: Limosilactobacillus fermentum KMB_613 organism-specific Integrated Microbial Genomes
8003880526: Limosilactobacillus fermentum LfU21 organism-specific Integrated Microbial Genomes
2937169580: Limosilactobacillus fermentum DS13_7 organism-specific Integrated Microbial Genomes
2904762873: Limosilactobacillus fermentum DR9 organism-specific Integrated Microbial Genomes
2960733785: Limosilactobacillus fermentum AF11-4-H organism-specific Integrated Microbial Genomes
2937149021: Limosilactobacillus fermentum RI-508 organism-specific Integrated Microbial Genomes
2904266629: Limosilactobacillus fermentum YL-11 organism-specific Integrated Microbial Genomes
2904270735: Limosilactobacillus fermentum VRI-003 organism-specific Integrated Microbial Genomes
8084937505: Limosilactobacillus fermentum VSI05 organism-specific Integrated Microbial Genomes
2904290256: Limosilactobacillus fermentum SRCM 103290 organism-specific Integrated Microbial Genomes
2960721546: Limosilactobacillus fermentum 279 organism-specific Integrated Microbial Genomes
2925433130: Limosilactobacillus fermentum SRCM103285 organism-specific Integrated Microbial Genomes
2937155740: Limosilactobacillus fermentum NCDC 400 organism-specific Integrated Microbial Genomes
2937176711: Limosilactobacillus fermentum 311 organism-specific Integrated Microbial Genomes
2960716351: Limosilactobacillus fermentum KMB_612 organism-specific Integrated Microbial Genomes
2983182406: Limosilactobacillus fermentum AGA52 organism-specific Integrated Microbial Genomes
2960706435: Limosilactobacillus fermentum CECT 9269 organism-specific Integrated Microbial Genomes
2939912173: Limosilactobacillus fermentum AGA52 organism-specific Integrated Microbial Genomes
2912355060: Limosilactobacillus fermentum LAC FRN-92 organism-specific Integrated Microbial Genomes
2957527777: Limosilactobacillus fermentum AF16-22LB organism-specific Integrated Microbial Genomes
8113723581: Lactobacillus fermentum DSM 20052 organism-specific Integrated Microbial Genomes
8116802094: Lactobacillus fermentum LMG 6902 organism-specific Integrated Microbial Genomes
2651869820: Limosilactobacillus fermentum UCO-979C organism-specific Integrated Microbial Genomes
2937160009: Limosilactobacillus fermentum AF15-40LB organism-specific Integrated Microbial Genomes
2645727920: Limosilactobacillus fermentum HFB3 organism-specific Integrated Microbial Genomes
2667527935: Limosilactobacillus fermentum 39 organism-specific Integrated Microbial Genomes
2657245627: Limosilactobacillus cellobiosus DSM 20055 organism-specific Integrated Microbial Genomes
2663762973: Limosilactobacillus fermentum 222 organism-specific Integrated Microbial Genomes
2872424090: Limosilactobacillus fermentum IMDO 130101 organism-specific Integrated Microbial Genomes
2877520082: Limosilactobacillus fermentum B1 28 organism-specific Integrated Microbial Genomes
2875192170: Limosilactobacillus fermentum MTCC 25067 organism-specific Integrated Microbial Genomes
2875197216: Limosilactobacillus fermentum LDTM 7301 organism-specific Integrated Microbial Genomes
2868000990: Limosilactobacillus fermentum MTCC 5898 organism-specific Integrated Microbial Genomes
2721755580: Limosilactobacillus fermentum 47-7 organism-specific Integrated Microbial Genomes
2872417205: Limosilactobacillus fermentum FTDC 8312 organism-specific Integrated Microbial Genomes
2700989528: Limosilactobacillus fermentum 90 TC-4 organism-specific Integrated Microbial Genomes
2721755775: Limosilactobacillus fermentum NCC 2970 organism-specific Integrated Microbial Genomes
2879979390: Limosilactobacillus fermentum LfQi6 organism-specific Integrated Microbial Genomes
2937171803: Limosilactobacillus fermentum CRL1446 organism-specific Integrated Microbial Genomes
2907624479: Limosilactobacillus fermentum CBA7106 organism-specific Integrated Microbial Genomes
8055485810: Limosilactobacillus fermentum EFEL6800 organism-specific Integrated Microbial Genomes
2960731515: Limosilactobacillus fermentum DS19_7 organism-specific Integrated Microbial Genomes
2937133037: Limosilactobacillus fermentum UMB0187 organism-specific Integrated Microbial Genomes
2957515132: Limosilactobacillus fermentum 779_LFER organism-specific Integrated Microbial Genomes
2960729328: Limosilactobacillus fermentum BFE 6620 organism-specific Integrated Microbial Genomes
Limosilactobacillus fermentum (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Limosilactobacillus fermentum type strain (SI-ID 3285) meta-databases StrainInfo, Leibniz Institute DSMZ
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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