Taxonomy browser Taxonomy Browser (Treponema pallidum subsp. pallidum)

Entrez records
Database name	Direct links	Subtree links	Links from type
BioProject	36	47	-
BioSample	1,095	2,127	-
Conserved Domains	3	3	-
Gene	-	9,720	-
Identical Protein Groups	5,424	6,132	-
Nucleotide	1,576	1,759	111
PMC	13	13	-
Protein	87,087	96,345	-
SRA	1,191	2,691	-
Structure	1	22	-
Taxonomy	7	7	-

Treponema pallidum subsp. pallidum

Taxonomy ID: 161 (for references in articles please use NCBI:txid161)

current name

"Treponema pallidum subsp. pallidum" (Schaudinn and Hoffmann 1905) Schaudinn 1905 , effective name²⁾

type strain of Treponema pallidum: personal : Nichols , DSM : 117211 , BEI Resources : NR-59701

equivalent:

Treponema pallidum pallidum

Genbank common name: syphilis treponeme
NCBI BLAST name: spirochetes
Rank: subspecies
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage(full): cellular organisms; Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia; Spirochaetales; Treponemataceae; Treponema; Treponema pallidum

Notes:

1) This nominotypical infraspecies name or autonym shares type material with its parent species.
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).

Comments and References:

Smibert RM (1984)

Smibert, R.M. "Genus III Treponema Schaudinn 1905, 1728AL" In: (ed.) N.R. Krieg and J.G. Holt. Bergey's Manual of Systematic Bacteriology, vol. 1 (1984) Williams and Wilkins, Baltimore. pp. 49-57. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Treponema pallidum X-4	organism-specific	BioCyc
Treponema pallidum X-4	organism-specific	BioCyc
Treponema pallidum X-4	organism-specific	BioCyc
Treponema pallidum X-4	organism-specific	BioCyc
GOLD: 57 Organisms	organism-specific	Genomes On Line Database
2850662941: Treponema pallidum pallidum CW83	organism-specific	Integrated Microbial Genomes
2718217817: Treponema pallidum pallidum 14aa Nichols Houston E	organism-specific	Integrated Microbial Genomes
2721755742: Treponema pallidum pallidum PT_SIF1252	organism-specific	Integrated Microbial Genomes
2721755791: Treponema pallidum pallidum PT_SIF0877_3	organism-specific	Integrated Microbial Genomes
2721755743: Treponema pallidum pallidum PT_SIF0751	organism-specific	Integrated Microbial Genomes
2850661903: Treponema pallidum pallidum CW84	organism-specific	Integrated Microbial Genomes
2844517364: Treponema pallidum pallidum CW59	organism-specific	Integrated Microbial Genomes
2847446465: Treponema pallidum pallidum CW65	organism-specific	Integrated Microbial Genomes
2718218263: Treponema pallidum pallidum PT_SIF0908	organism-specific	Integrated Microbial Genomes
2728369398: Treponema pallidum pallidum 15df UW254	organism-specific	Integrated Microbial Genomes
2721755460: Treponema pallidum pallidum PT_SIF1242	organism-specific	Integrated Microbial Genomes
2728369400: Treponema pallidum pallidum PT_SIF1299	organism-specific	Integrated Microbial Genomes
2718218346: Treponema pallidum pallidum PT_SIF1200	organism-specific	Integrated Microbial Genomes
2847442318: Treponema pallidum pallidum CW88	organism-specific	Integrated Microbial Genomes
2850668133: Treponema pallidum pallidum CW86	organism-specific	Integrated Microbial Genomes
2850663977: Treponema pallidum pallidum Philadelphia 1	organism-specific	Integrated Microbial Genomes
2718217823: Treponema pallidum pallidum PT_SIF0857	organism-specific	Integrated Microbial Genomes
2850666054: Treponema pallidum pallidum CW87	organism-specific	Integrated Microbial Genomes
2718217822: Treponema pallidum pallidum Seattle Nichols	organism-specific	Integrated Microbial Genomes
2718218219: Treponema pallidum pallidum 14aa	organism-specific	Integrated Microbial Genomes
2718217820: Treponema pallidum pallidum PT_SIF1261	organism-specific	Integrated Microbial Genomes
2721755779: Treponema pallidum pallidum 13dd UW189	organism-specific	Integrated Microbial Genomes
2721755786: Treponema pallidum pallidum 14aa Nichols Houston J	organism-specific	Integrated Microbial Genomes
2718217836: Treponema pallidum pallidum 15df UW228	organism-specific	Integrated Microbial Genomes
2718218260: Treponema pallidum pallidum PT_SIF1167	organism-specific	Integrated Microbial Genomes
2721755744: Treponema pallidum pallidum PT_SIF0954	organism-specific	Integrated Microbial Genomes
2687453184: Treponema pallidum pallidum Amoy	organism-specific	Integrated Microbial Genomes
2721755780: Treponema pallidum pallidum PT_SIF1196	organism-specific	Integrated Microbial Genomes
2718217818: Treponema pallidum pallidum PT_SIF1348	organism-specific	Integrated Microbial Genomes
2850660864: Treponema pallidum pallidum Haiti B	organism-specific	Integrated Microbial Genomes
2721755738: Treponema pallidum pallidum PT_SIF1156	organism-specific	Integrated Microbial Genomes
2847448537: Treponema pallidum pallidum UZ1974	organism-specific	Integrated Microbial Genomes
2721755461: Treponema pallidum pallidum PT_SIF1020	organism-specific	Integrated Microbial Genomes
2718218262: Treponema pallidum pallidum PT_SIF1140	organism-specific	Integrated Microbial Genomes
2718218220: Treponema pallidum pallidum 14dg UW074	organism-specific	Integrated Microbial Genomes
2721755745: Treponema pallidum pallidum PT_SIF1135	organism-specific	Integrated Microbial Genomes
2721755740: Treponema pallidum pallidum PT_SIF0697	organism-specific	Integrated Microbial Genomes
2718218350: Treponema pallidum pallidum 14df UW391	organism-specific	Integrated Microbial Genomes
2844518400: Treponema pallidum pallidum CW82	organism-specific	Integrated Microbial Genomes
2850667093: Treponema pallidum pallidum CW56	organism-specific	Integrated Microbial Genomes
2721755790: Treponema pallidum pallidum PT_SIF1127	organism-specific	Integrated Microbial Genomes
2841505167: Treponema pallidum pallidum Grady	organism-specific	Integrated Microbial Genomes
2721755474: Treponema pallidum pallidum PT_SIF1183	organism-specific	Integrated Microbial Genomes
2847444393: Treponema pallidum pallidum CW85	organism-specific	Integrated Microbial Genomes
2721755792: Treponema pallidum pallidum PT_SIF1280	organism-specific	Integrated Microbial Genomes
2721755793: Treponema pallidum pallidum CDC-A	organism-specific	Integrated Microbial Genomes
2718217821: Treponema pallidum pallidum PT_SIF1142	organism-specific	Integrated Microbial Genomes
2721755782: Treponema pallidum pallidum PT_SIF1278	organism-specific	Integrated Microbial Genomes
2847447500: Treponema pallidum pallidum CW30	organism-specific	Integrated Microbial Genomes
2718218181: Treponema pallidum pallidum PT_SIF1002	organism-specific	Integrated Microbial Genomes
2718217819: Treponema pallidum pallidum PT_SIF1063	organism-specific	Integrated Microbial Genomes

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.