Taxonomy browser (Lactobacillus acidophilus)

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Taxonomy browser (Lactobacillus acidophilus)

Lactobacillus acidophilus

Taxonomy ID: 1579 (for references in articles please use NCBI:txid1579)

current name

Lactobacillus acidophilus Johnson et al. 1980

type strain of Lactobacillus acidophilus: ATCC :4356, CCUG :5917, CIP:76.13, DSM :20079, IFO :13951, JCM :1132, BCCM/LMG :13550, BCCM/LMG :9433, NBRC :13951, NCTC :12980, NRRL :B-4495, VKM :B-1660, BCRC :10695

homotypic synonym:

"Bacillus acidophilus" Moro 1900, effective name¹⁾

Lactobacillus acidophilus (Moro 1900) Hansen and Mocquot 1970

includes:

Lactobacillus sp. JCM 1033

Lactobacillus sp. JCM 1034

Lactobacillus sp. JCM 1035

Lactobacillus acidophilus B6T7

NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

"Thermobacterium intestinale" Orla-Jensen et al. 1936, effective name²⁾

Lineage( full ): cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	9,463	7,860	356
Protein	102,867	84,960	-
Structure	46	27	-
GEO Datasets	128	100	-
PubMed Central	11,557	11,557	-
Gene	12,130	3,897	-
SRA Experiments	439	433	-
Protein Clusters	1,576	1,576	-
Identical Protein Groups	17,748	16,646	-
BioProject	159	135	-
BioSample	555	541	17
Datasets Genome	146	132	-
PubChem BioAssay	12	12	-
Taxonomy	13	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).

Comments and References:

Lactobacillus acidophilus

Lactobacillus acidophilus (Moro 1900) Hansen and Mocquot 1970 (Approved Lists 1980) has priority over Lactobacillus acidophilus Johnson et al. 1980.

Falsen E et al. (1999) (reference with type strain information)

Falsen, E., Pascual, C., Sjoden, B., Ohlen, M., and Collins, M.D. "Phenotypic and phylogenetic characterization of a novel Lactobacillus species from human sources: description of Lactobacillus iners sp. nov." Int. J. Syst. Bacteriol. (1999) 49:217-221.

Hansen PA & Mocquot G (1970)

Hansen, P.A., and Mocquot, G. "Lactobacillus acidophilus (Moro) comb. nov." Int. J. Syst. Bacteriol. (1970) 20:325-327. [No PubMed record available.]

Johnson JL et al. (1980)

Johnson, J.L., Phelps, C.F., Cummins, C.S., London, J., and Gasser, F. "Taxonomy of the Lactobacillus acidophilus group." Int. J. Syst. Bacteriol. (1980) 30:53-68. [No PubMed record available.]

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Lactobacillus acidophilus	meta-databases	BacDive - Free access to bacterial information database
12 records from this provider	organism-specific	BioCyc
Lactobacillus acidophilus Johnson et al., 1980	taxonomy/phylogenetic	Encyclopedia of life
GOLD: 50 Organisms	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Lactobacillus acidophilus	culture/stock collections	Global Catalogue of Microorganisms
22 records from this provider	organism-specific	Integrated Microbial Genomes
OMA	taxonomy/phylogenetic	OMA Browser: Orthologous MAtrix
Lactobacillus acidophilus \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry
Wikipedia	taxonomy/phylogenetic	iPhylo

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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