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Taxonomy browser (Clostridium perfringens)

Clostridium perfringens

Taxonomy ID: 1502 (for references in articles please use NCBI:txid1502)
current name
Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980) in [Skerman VBD et al. (1980), Hauduroy P et al. (1937)]
type strain of Clostridium perfringens: ATCC:13124, BCRC:10913, CCUG:1795, CIP:103409, DSM:756, JCM:1290, BCCM/LMG:11264, NCAIM B.01417, NCCB:89165, NCIMB:6125, NCTC:8237, ATCC:19408
basionym:
"Bacillus perfringens" Veillon and Zuber 1898, effective name in [Veillon A & Zuber A (1898)]
includes:
Clostridium sp. NCIM 2677
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Bacterium welchii" Migula 1900, effective name 1)
heterotypic synonym
"Clostridium plagarum" (Prévot 1938) Smith and Hobbs 1974, effective name 2) in [Smith LDS & Hobbs G (1974)]
reference strain of "Clostridium plagarum": ATCC:25768, NCIMB:10620, DSM:2943
Lineage( full )
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 109,861 104,608 49
Protein 960,393 891,732 -
Structure 265 165 -
Popset 164 162 -
GEO Datasets 342 291 -
PubMed Central 14,728 14,728 -
Gene 18,637 6,865 -
SRA Experiments 1,892 1,395 -
Protein Clusters 3,604 3,604 -
Identical Protein Groups 562,817 560,575 -
BioProject 284 251 -
BioSample 3,566 3,082 12
Datasets Genome 2,062 2,029 -
PubChem BioAssay 277 269 -
Taxonomy 22 1 -

Notes:

Comments and References:
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Hauduroy P et al. (1937)
Hauduroy, P., Ehringer, G., Urbain, A., Guillot, G., and Magrou, J.: Dictionaire des bactéries pathogènes. Masson et Cie, Paris (1937). [No PubMed record available.]
Veillon A & Zuber A (1898)
Veillon, A., and Zuber, A. "Recherches sur quelques microbes strictement anaérobies et leur rôle en pathologie." Archives de Medecine Experimentale et d'Anatomie Pathologique (1898) 10:517-545. [No PubMed record available.]
Smith LDS & Hobbs G (1974)
Smith, L.D.S., and Hobbs, G. "Genus III Clostridium Prazmowski 1880, 23." In: Buchanan and Gibbons (eds.), Bergeys's Manual of Determinative Bacteriology, 8th Edition. The Williams and Wilkins Co., Baltimore, pp. 551-572. 1974.
image:Clostridium perfringens
Canard B et al. (1992)
Canard, B., Garnier, T., Lafay, B., Christen, R., Cole, S.T. "Phylogenetic analysis of the pathogenic anaerobe Clostridium perfringens using the 16S rRNA nucleotide sequence." Int. J. Syst. Bacteriol. (1992) 42(2):312-314.
Migula W (1900)
Migula, W. System der Bakterien, Vol. 2. (1900) Gustav Fischer, Jena. [No PubMed record available.]
Nakamura S et al. (1976)
Nakamura, S., Sakurai, M., Nishida, S., Tatsuki, T., Yanagase, Y., Higashi, Y., and Amano, T. "Lecithinase-negative variants of Clostridium perfringens: the identity of C. plagarum with C. perfringens." Can. J. Microbiol. (1976) 22:1497-1501.
genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Clostridium perfringens meta-databases BacDive
4 records from this provider organism-specific BioCyc
Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD: 168 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Clostridium perfringens culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
50 records from this provider organism-specific Integrated Microbial Genomes
Clostridium perfringens (Veillon and Zuber, 1898) Hauduroy et al., 1937 taxonomy/phylogenetic Integrated Taxonomic Information System
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Clostridium perfringens | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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