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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 316 355 -
BioSample 6,682 7,209 -
GEO DataSets 296 347 -
Gene 6,868 18,640 -
Identical Protein Groups 733,702 736,192 -
Nucleotide 142,873 148,059 49
PubChem BioAssay 269 277 -
PMC 14,728 14,728 -
Protein 1,701,565 1,786,603 -
SRA 1,700 2,242 -
Structure 188 292 -
Taxonomy 22 22 -

Clostridium perfringens

Taxonomy ID: 1502 (for references in articles please use ncbitaxon:1502)
current name
Clostridium perfringens  (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980) in  in  [Skerman VBD et al. (1980)] , [Hauduroy P et al. (1937)]
type strain of Clostridium perfringens: ATCC : 13124 , BCRC : 10913 , CCUG : 1795 , CIP : 103409 , DSM : 756 , JCM : 1290 , BCCM/LMG : 11264 , : , NCCB : 89165 , NCIMB : 6125 , NCTC : 8237 , ATCC : 19408
includes:
Clostridium sp. NCIM 2677
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym "Clostridium plagarum"  (PreĢvot 1938) Smith and Hobbs 1974 , effective name  1) in [Smith LDS & Hobbs G (1974)]
reference strain of Clostridium plagarum: ATCC : 25768 , NCIMB : 10620 , DSM : 2943
heterotypic synonym "Bacterium welchii"  Migula 1900 , effective name  2)
Lineage(full)
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium

Notes:

Comments and References:
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Hauduroy P et al. (1937)
Veillon A & Zuber A (1898)
Smith LDS & Hobbs G (1974)
genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
image:Clostridium perfringens
Image by from Wikimedia Commons under a Public Domain license.
* Image may not have been verified for accuracy by NCBI Taxonomy.
Canard B et al. (1992)
Canard, B., Garnier, T., Lafay, B., Christen, R., Cole, S.T. "Phylogenetic analysis of the pathogenic anaerobe Clostridium perfringens using the 16S rRNA nucleotide sequence." Int. J. Syst. Bacteriol. (1992) 42(2):312-314.
Migula W (1900)
Migula, W. System der Bakterien, Vol. 2. (1900) Gustav Fischer, Jena. [No PubMed record available.]
Nakamura S et al. (1976)
Nakamura, S., Sakurai, M., Nishida, S., Tatsuki, T., Yanagase, Y., Higashi, Y., and Amano, T. "Lecithinase-negative variants of Clostridium perfringens: the identity of C. plagarum with C. perfringens." Can. J. Microbiol. (1976) 22:1497-1501.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Clostridium perfringens type strain (BD-ID 2631) meta-databases BacDive
Clostridium perfringens FORC_025 organism-specific BioCyc
Clostridium perfringens MJR7757A organism-specific BioCyc
Clostridium perfringens FORC_025 organism-specific BioCyc
Clostridium perfringens MJR7757A organism-specific BioCyc
Clostridium perfringens MJR7757A organism-specific BioCyc
Clostridium perfringens FORC_025 organism-specific BioCyc
Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD: 168 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Clostridium perfringens culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
8053600135: Clostridium perfringens JFP983 organism-specific Integrated Microbial Genomes
8053555446: Clostridium perfringens JFP916 organism-specific Integrated Microbial Genomes
8059813851: Clostridium perfringens PBD1 organism-specific Integrated Microbial Genomes
8053562455: Clostridium perfringens JFP728 organism-specific Integrated Microbial Genomes
8053565929: Clostridium perfringens BzA organism-specific Integrated Microbial Genomes
8059818317: Clostridium perfringens JFP774 organism-specific Integrated Microbial Genomes
8053579557: Clostridium perfringens TAM-NE43 organism-specific Integrated Microbial Genomes
8053589491: Clostridium perfringens An185 organism-specific Integrated Microbial Genomes
8053620928: Clostridium perfringens An68 organism-specific Integrated Microbial Genomes
8053551904: Clostridium perfringens JFP718 organism-specific Integrated Microbial Genomes
8061928554: Clostridium perfringens JFP961 organism-specific Integrated Microbial Genomes
8053559014: Clostridium perfringens JFP795 organism-specific Integrated Microbial Genomes
8053630555: Clostridium perfringens JFP804 organism-specific Integrated Microbial Genomes
8050133599: Clostridium perfringens PBS5 organism-specific Integrated Microbial Genomes
8059829755: Clostridium perfringens K473 organism-specific Integrated Microbial Genomes
8053634112: Clostridium perfringens NCTC 9851 organism-specific Integrated Microbial Genomes
8053572620: Clostridium perfringens JFP921 organism-specific Integrated Microbial Genomes
8053592618: Clostridium perfringens ITX1105-12MP organism-specific Integrated Microbial Genomes
8053548948: Clostridium perfringens NCTC 10613 organism-specific Integrated Microbial Genomes
8053624047: Clostridium perfringens 1207_CPER organism-specific Integrated Microbial Genomes
8061924750: Clostridium perfringens Pennington organism-specific Integrated Microbial Genomes
8053585874: Clostridium perfringens NCTC 8081 organism-specific Integrated Microbial Genomes
8059821718: Clostridium perfringens W1319 organism-specific Integrated Microbial Genomes
8053576106: Clostridium perfringens JFP828 organism-specific Integrated Microbial Genomes
8053617950: Clostridium perfringens NCTC 8679 organism-specific Integrated Microbial Genomes
8122462554: Clostridium perfringens FDAARGOS_903 organism-specific Integrated Microbial Genomes
8053607156: Clostridium perfringens NCTC 3182 organism-specific Integrated Microbial Genomes
2684623210: Clostridium perfringens JP55 organism-specific Integrated Microbial Genomes
2654587741: Clostridium perfringens FORC_003 organism-specific Integrated Microbial Genomes
2684623151: Clostridium perfringens JP838 organism-specific Integrated Microbial Genomes
2872333478: Clostridium perfringens Del1 organism-specific Integrated Microbial Genomes
2860383970: Clostridium perfringens EHE-NE18 organism-specific Integrated Microbial Genomes
2851753185: Clostridium perfringens CBA7123 organism-specific Integrated Microbial Genomes
2877432579: Clostridium perfringens JXJA17 organism-specific Integrated Microbial Genomes
2859907697: Clostridium perfringens LLY_N11 organism-specific Integrated Microbial Genomes
2875113875: Clostridium perfringens NCTC 13170 organism-specific Integrated Microbial Genomes
2851756177: Clostridium perfringens EHE-NE18 organism-specific Integrated Microbial Genomes
2872348207: Clostridium perfringens NCTC 2837 organism-specific Integrated Microbial Genomes
2844476669: Clostridium perfringens CP15 organism-specific Integrated Microbial Genomes
8053569082: Clostridium perfringens JFP992 organism-specific Integrated Microbial Genomes
8053640025: Clostridium perfringens SYD-NE41 organism-specific Integrated Microbial Genomes
8053603681: Clostridium perfringens JFP836 organism-specific Integrated Microbial Genomes
8053614103: Clostridium perfringens JFP810 organism-specific Integrated Microbial Genomes
8053596342: Clostridium perfringens TAM-NE46 organism-specific Integrated Microbial Genomes
8053636987: Clostridium perfringens NCTC 8359 organism-specific Integrated Microbial Genomes
8053582671: Clostridium perfringens AF30-3 organism-specific Integrated Microbial Genomes
8061932043: Clostridium perfringens 48 organism-specific Integrated Microbial Genomes
2718218460: Clostridium perfringens FORC_025 organism-specific Integrated Microbial Genomes
8059826058: Clostridium perfringens T3381 organism-specific Integrated Microbial Genomes
8053610654: Clostridium perfringens JFP833 organism-specific Integrated Microbial Genomes
8053627015: Clostridium perfringens JFP980 organism-specific Integrated Microbial Genomes
Clostridium perfringens (Veillon and Zuber, 1898) Hauduroy et al., 1937 taxonomy/phylogenetic Integrated Taxonomic Information System
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Clostridium perfringens | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Clostridium perfringens type strain (SI-ID 38660) meta-databases StrainInfo, Leibniz Institute DSMZ
Clostridium perfringens type strain (SI-ID 289341) meta-databases StrainInfo, Leibniz Institute DSMZ
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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