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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 138 207 -
BioSample 2,163 2,531 -
Conserved Domains 1 1 -
GEO DataSets 428 443 -
Gene 8,492 61,843 -
Identical Protein Groups 388,157 406,431 -
Nucleotide 58,524 78,111 144
PubChem BioAssay 260 304 -
PMC 6,649 6,649 -
Protein 618,025 803,738 -
SRA 1,418 1,625 -
Structure 255 305 -
Taxonomy 279 279 -

Clostridium botulinum

Taxonomy ID: 1491 (for references in articles please use NCBI:txid1491)
current name
Clostridium botulinum (van Ermengem 1896) Bergey et al. 1923 (Approved Lists 1980)
type strain of Clostridium botulinum: ATCC : 25763 , CIP : 104310 , CDC:KA : 38 , personal : ELTDK 103 , VPI : 1550 , VTT:E : 98821
homotypic synonym:
"Ermengemillus botulinus"  (van Ermengem 1896) Heller 1922 , effective name  1)
"Botulobacillus botulinus"  (van Ermengem 1896) Orla-Jensen 1909 , effective name  3)
basionym:
"Bacillus botulinus"  van Ermengem 1896 , effective name  2)
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym Pacinia putrifica
heterotypic synonym Clostridium putrificum  (Trevisan 1889) Reddish and Rettger 1922 (Approved Lists 1980)
type strain of Clostridium putrificum: ATCC : 25784 , BCRC : 14514 , CCUG : 15942 , CIP : 60.54 , DSM : 1734 , JCM : 1410 , NCIMB : 10677 , NCTC : 13037 , VPI : 4440
Lineage(full)
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium

Notes:

Comments and References:

image:Clostridium botulinum
Image by from Wikimedia Commons under a Public Domain license.
* Image may not have been verified for accuracy by NCBI Taxonomy.
Bergey DH et al. (1923)
Bergey, D.H., Harrison, F.C., Breed, R.S., Hammer B.W., and Huntoon, F.M. Bergey's Manual of Determinative Bacteriology, 1st ed. (1923) The Williams and Wilkins Co., Baltimore, pp. 1-442. [No PubMed record available.]
Collins MD & East AK (2004)
Collins, M.D., and East, A.K. "Phylogeny and taxonomy of the food-borne pathogen Clostridium botulinum and its neurotoxins." J. Appl. Microbiol. (1998) 84:5-17.
Judicial Commission (1997)
Judicial Commission of the International Committee on Systematic Bacteriology. "VIIIth International Congress of Microbiology and Applied Bacteriology. Minutes of the meetings, 17 and 22August 1996, Jerusalem, Israel." Int. J. Syst. Bacteriol. (1997) 47:240-241. [No PubMed record available.]
JUDICIAL OPINION 69 (1999)
Judicial Commission of the International Committee on Systematic Bacteriology. "Rejection of Clostridium putrificum and conservation of Clostridium botulinum and Clostridium sporogenes-Opinion 69." Int. J. Syst. Bacteriol. (1999) 49:339.
Olsen I et al. (1995)
Olsen, I., Johnson, J.L., Moore, L.V.H., and Moore, W.E.C. "Rejection of Clostridium putrificum and conservation of Clostridium botulinum and Clostridium sporogenes. Request for an opinion." Int. J. Syst. Bacteriol. (1995) 45:414. [No PubMed record available.]
Orla-Jensen S (1909)
Orla-Jensen, S. "Die Hauptlinien des naturlichen Bakterien-systems." Zentralbl. Bakteriol. Parasitenkd. Infektionskr. Hyg. Abt. II (1909) 22:97-98,305-346. [No PubMed record available.]
Skerman VBD et al. (1980) (Clostridium botulinum)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.
Skerman VBD et al. (1980) (Clostridium putrificum)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.
Trevisan V (1889)
Trevisan, V. I generie e le specie della Batteriacee. (1889) Zanaboni and Gabuzzi, Milan, pp. 1-35. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Clostridium putrificum type strain (BD-ID 2713) meta-databases BacDive
Clostridium botulinum type strain (BD-ID 166627) meta-databases BacDive
Clostridium botulinum (van Ermengem 1896) Bergey et al. 1923 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD: 202 Organisms organism-specific Genomes On Line Database
Clostridium botulinum culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
2724679577: Clostridium botulinum SU0729 organism-specific Integrated Microbial Genomes
2713897211: Clostridium botulinum SU1306 organism-specific Integrated Microbial Genomes
2724679571: Clostridium botulinum SU1072 organism-specific Integrated Microbial Genomes
2724679570: Clostridium botulinum SU1054 organism-specific Integrated Microbial Genomes
2713897202: Clostridium botulinum Hall 8388A organism-specific Integrated Microbial Genomes
2879905790: Clostridium botulinum CDC_54064 organism-specific Integrated Microbial Genomes
2724679553: Clostridium botulinum Hall 4834 organism-specific Integrated Microbial Genomes
2877461428: Clostridium botulinum 1169 organism-specific Integrated Microbial Genomes
2859903202: Clostridium botulinum CDC_69096 organism-specific Integrated Microbial Genomes
2851748921: Clostridium botulinum CDC_67071 organism-specific Integrated Microbial Genomes
2724679573: Clostridium botulinum SU1112 organism-specific Integrated Microbial Genomes
2724679563: Clostridium botulinum SU1937 organism-specific Integrated Microbial Genomes
2851771742: Clostridium botulinum Mfbjulcb8 organism-specific Integrated Microbial Genomes
2724679566: Clostridium botulinum SU1887 organism-specific Integrated Microbial Genomes
2724679551: Clostridium botulinum ATCC 17843 organism-specific Integrated Microbial Genomes
2700989515: Clostridium botulinum CDC68016 organism-specific Integrated Microbial Genomes
2724679559: Clostridium botulinum Walls 8G organism-specific Integrated Microbial Genomes
2713897207: Clostridium botulinum KF Meyer 33 organism-specific Integrated Microbial Genomes
2875102487: Clostridium botulinum F1425 organism-specific Integrated Microbial Genomes
2724679554: Clostridium botulinum Prevot Dewping organism-specific Integrated Microbial Genomes
2700989516: Clostridium botulinum CDC68016NT organism-specific Integrated Microbial Genomes
2713897209: Clostridium botulinum AM1295 organism-specific Integrated Microbial Genomes
2724679579: Clostridium botulinum SU1891 organism-specific Integrated Microbial Genomes
2724679568: Clostridium botulinum SU1934 organism-specific Integrated Microbial Genomes
2718218005: Clostridium botulinum CDC_53174 organism-specific Integrated Microbial Genomes
2724679557: Clostridium botulinum Prevot Ped 1 organism-specific Integrated Microbial Genomes
2713897205: Clostridium botulinum Prevot 910 organism-specific Integrated Microbial Genomes
2724679580: Clostridium botulinum SU1169 organism-specific Integrated Microbial Genomes
2844472839: Clostridium botulinum Mfbjulcb6 organism-specific Integrated Microbial Genomes
2724679567: Clostridium botulinum SU1275 organism-specific Integrated Microbial Genomes
2724679578: Clostridium botulinum CDC 795 organism-specific Integrated Microbial Genomes
2724679560: Clostridium botulinum AM370 organism-specific Integrated Microbial Genomes
2724679556: Clostridium botulinum CDC 5247 organism-specific Integrated Microbial Genomes
2713897213: Clostridium botulinum K3 organism-specific Integrated Microbial Genomes
2870148823: Clostridium botulinum CFSAN034202 organism-specific Integrated Microbial Genomes
2870119041: Clostridium botulinum CFSAN034200 organism-specific Integrated Microbial Genomes
2724679555: Clostridium botulinum L-572 organism-specific Integrated Microbial Genomes
2870145114: Clostridium botulinum DFPST0029 organism-specific Integrated Microbial Genomes
2872340794: Clostridium botulinum B609 organism-specific Integrated Microbial Genomes
2870131136: Clostridium botulinum Af650 organism-specific Integrated Microbial Genomes
2870123273: Clostridium botulinum B515 organism-specific Integrated Microbial Genomes
2877435729: Clostridium botulinum B742 organism-specific Integrated Microbial Genomes
2870141257: Clostridium botulinum RF5 organism-specific Integrated Microbial Genomes
2713897200: Clostridium botulinum ATCC 449 organism-specific Integrated Microbial Genomes
2724679574: Clostridium botulinum SU0998 organism-specific Integrated Microbial Genomes
2870127290: Clostridium botulinum CFSAN064329 organism-specific Integrated Microbial Genomes
2718218349: Clostridium botulinum CDC_67190 organism-specific Integrated Microbial Genomes
2724679569: Clostridium botulinum SU1304 organism-specific Integrated Microbial Genomes
2724679565: Clostridium botulinum SU1917 organism-specific Integrated Microbial Genomes
2877447733: Clostridium botulinum MAP 5 organism-specific Integrated Microbial Genomes
2859899395: Clostridium botulinum AM1051 organism-specific Integrated Microbial Genomes
2700989517: Clostridium botulinum Prevot1662 organism-specific Integrated Microbial Genomes
8019416050: Clostridium botulinum Su1036 organism-specific Integrated Microbial Genomes
8019420162: Clostridium botulinum Su0604 organism-specific Integrated Microbial Genomes
8114561737: Clostridium botulinum ATCC 25763 organism-specific Integrated Microbial Genomes
8118406175: Clostridium botulinum 3859/11 organism-specific Integrated Microbial Genomes
8109063872: Clostridium botulinum NCTC 13037 organism-specific Integrated Microbial Genomes
2724679558: Clostridium botulinum Prevot R81-3A organism-specific Integrated Microbial Genomes
2718218351: Clostridium botulinum CDC_1632 organism-specific Integrated Microbial Genomes
2713897208: Clostridium botulinum CDC KA-95B organism-specific Integrated Microbial Genomes
2700989518: Clostridium botulinum Prevot25NCASE organism-specific Integrated Microbial Genomes
2713897199: Clostridium botulinum An436 organism-specific Integrated Microbial Genomes
2877454473: Clostridium botulinum BrDura organism-specific Integrated Microbial Genomes
2724679572: Clostridium botulinum SU1074 organism-specific Integrated Microbial Genomes
2724679576: Clostridium botulinum SU0634 organism-specific Integrated Microbial Genomes
2724679581: Clostridium botulinum SU0945 organism-specific Integrated Microbial Genomes
2700989514: Clostridium botulinum CDC41370NT organism-specific Integrated Microbial Genomes
2713897203: Clostridium botulinum Hall 8857Ab organism-specific Integrated Microbial Genomes
2724679550: Clostridium botulinum CDC 1744 organism-specific Integrated Microbial Genomes
2713897206: Clostridium botulinum Hall 80 organism-specific Integrated Microbial Genomes
2872362226: Clostridium botulinum AM1195 organism-specific Integrated Microbial Genomes
2713897212: Clostridium botulinum K15 organism-specific Integrated Microbial Genomes
2877428799: Clostridium botulinum Mauritius organism-specific Integrated Microbial Genomes
2713897210: Clostridium botulinum AM553 organism-specific Integrated Microbial Genomes
2859895461: Clostridium botulinum F160 organism-specific Integrated Microbial Genomes
2681813435: Clostridium botulinum SU0994 organism-specific Integrated Microbial Genomes
2675903382: Clostridium botulinum SU1064 organism-specific Integrated Microbial Genomes
2693429691: Clostridium botulinum 49511-CD organism-specific Integrated Microbial Genomes
2675903344: Clostridium botulinum CDC67187 organism-specific Integrated Microbial Genomes
2695420659: Clostridium botulinum 12LNR13-CD organism-specific Integrated Microbial Genomes
2660237905: Clostridium botulinum ATCC 25763 organism-specific Integrated Microbial Genomes
2657245102: Clostridium botulinum CDC41370 organism-specific Integrated Microbial Genomes
2663763217: Clostridium botulinum ATCC 7949 organism-specific Integrated Microbial Genomes
2695420606: Clostridium botulinum CDC28012 organism-specific Integrated Microbial Genomes
2675903247: Clostridium botulinum VPI 7124 organism-specific Integrated Microbial Genomes
2636415866: Clostridium botulinum NCTC 11219 organism-specific Integrated Microbial Genomes
2690316268: Clostridium botulinum CDC33702 organism-specific Integrated Microbial Genomes
2657245049: Clostridium botulinum CDC48761 organism-specific Integrated Microbial Genomes
2660238174: Clostridium botulinum 50867-CD organism-specific Integrated Microbial Genomes
2681813436: Clostridium botulinum SU1259 organism-specific Integrated Microbial Genomes
2681813434: Clostridium botulinum SU0801 organism-specific Integrated Microbial Genomes
2660238032: Clostridium botulinum ATCC 17786 organism-specific Integrated Microbial Genomes
2671180305: Clostridium botulinum CDC48719 organism-specific Integrated Microbial Genomes
2681813433: Clostridium botulinum SU0635W organism-specific Integrated Microbial Genomes
2663763402: Clostridium botulinum Walls 8G organism-specific Integrated Microbial Genomes
2675903681: Clostridium botulinum McClung 844 organism-specific Integrated Microbial Genomes
2660238075: Clostridium botulinum ATCC 51387 organism-specific Integrated Microbial Genomes
2660238149: Clostridium botulinum 43243-CD organism-specific Integrated Microbial Genomes
2698536452: Clostridium botulinum CDC42961 organism-specific Integrated Microbial Genomes
2667527854: Clostridium botulinum CDC67190 organism-specific Integrated Microbial Genomes
2667528001: Clostridium botulinum CDC37461 organism-specific Integrated Microbial Genomes
2671180539: Clostridium botulinum 12LNRI-CD organism-specific Integrated Microbial Genomes
2660238657: Clostridium botulinum 47295-DC organism-specific Integrated Microbial Genomes
2651869779: Clostridium botulinum NCTC 8550 organism-specific Integrated Microbial Genomes
2721755776: Clostridium botulinum CDC_69094 organism-specific Integrated Microbial Genomes
2671180403: Clostridium botulinum 38028-CD organism-specific Integrated Microbial Genomes
2663762825: Clostridium botulinum CDC33700 organism-specific Integrated Microbial Genomes
2667527760: Clostridium botulinum CDC37457 organism-specific Integrated Microbial Genomes
2671180483: Clostridium botulinum 71840-CD organism-specific Integrated Microbial Genomes
2671181058: Clostridium botulinum 48212-CD organism-specific Integrated Microbial Genomes
2660238194: Clostridium botulinum 12LNR10-CD organism-specific Integrated Microbial Genomes
2671181163: Clostridium botulinum ATCC 17843 organism-specific Integrated Microbial Genomes
2681813437: Clostridium botulinum SU1575NT organism-specific Integrated Microbial Genomes
2851767596: Clostridium botulinum A634 organism-specific Integrated Microbial Genomes
2597490289: Clostridium botulinum KAPB-3 organism-specific Integrated Microbial Genomes
2671180990: Clostridium botulinum LNC5-DC organism-specific Integrated Microbial Genomes
2663763297: Clostridium botulinum CDC28023 organism-specific Integrated Microbial Genomes
2663762878: Clostridium botulinum CDC66088 organism-specific Integrated Microbial Genomes
2597490296: Clostridium botulinum DB-2 organism-specific Integrated Microbial Genomes
2690316223: Clostridium botulinum Cbot-CD_29401 organism-specific Integrated Microbial Genomes
2879901938: Clostridium botulinum Mfbjulcb3 organism-specific Integrated Microbial Genomes
2875124551: Clostridium botulinum AM282 organism-specific Integrated Microbial Genomes
2671180858: Clostridium botulinum ATCC 17862 organism-specific Integrated Microbial Genomes
2713897204: Clostridium botulinum KF Meyer 126 organism-specific Integrated Microbial Genomes
2875128709: Clostridium botulinum F634 organism-specific Integrated Microbial Genomes
2724679564: Clostridium botulinum SU1274 organism-specific Integrated Microbial Genomes
2724679575: Clostridium botulinum SU0807 organism-specific Integrated Microbial Genomes
2877443644: Clostridium botulinum B305 organism-specific Integrated Microbial Genomes
2724679552: Clostridium botulinum 211 organism-specific Integrated Microbial Genomes
2713897201: Clostridium botulinum Hall 183 organism-specific Integrated Microbial Genomes
2724679561: Clostridium botulinum Mauritius organism-specific Integrated Microbial Genomes
2695420390: Clostridium botulinum 69285-CD organism-specific Integrated Microbial Genomes
2660238154: Clostridium botulinum CDC66221 organism-specific Integrated Microbial Genomes
2690316036: Clostridium botulinum ATCC 9564 organism-specific Integrated Microbial Genomes
2681813431: Clostridium botulinum AM1195 organism-specific Integrated Microbial Genomes
2698536316: Clostridium botulinum 55741-CD organism-specific Integrated Microbial Genomes
2660238492: Clostridium botulinum ATCC 23387 organism-specific Integrated Microbial Genomes
2660238114: Clostridium botulinum 58752-CD organism-specific Integrated Microbial Genomes
2681813177: Clostridium botulinum CDC52271 organism-specific Integrated Microbial Genomes
2681813432: Clostridium botulinum Prevot 697B organism-specific Integrated Microbial Genomes
2684623229: Clostridium botulinum 111 organism-specific Integrated Microbial Genomes
2695420555: Clostridium botulinum CDC52298 organism-specific Integrated Microbial Genomes
2675903405: Clostridium botulinum ATCC 7949 organism-specific Integrated Microbial Genomes
2636415839: Clostridium botulinum 277-00 organism-specific Integrated Microbial Genomes
2667527596: Clostridium botulinum Cbot-CD_58272 organism-specific Integrated Microbial Genomes
2681813430: Clostridium botulinum ATCC 9564 organism-specific Integrated Microbial Genomes
2690316301: Clostridium botulinum 51714-DC organism-specific Integrated Microbial Genomes
2690316317: Clostridium botulinum CDC66089 organism-specific Integrated Microbial Genomes
2651869840: Clostridium botulinum NCTC 8266 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Clostridium botulinum | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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