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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 141 163 -
BioSample 259 329 -
Conserved Domains 1 1 -
GEO DataSets 4 4 -
Gene 10,189 47,131 -
Identical Protein Groups 249,404 253,291 -
Nucleotide 15,324 19,355 149
PubChem BioAssay 17 17 -
PMC 2,368 2,368 -
Protein 512,067 554,265 -
SRA 164 233 -
Structure 33 33 -
Taxonomy 12 12 -

Paenibacillus polymyxa

Taxonomy ID: 1406 (for references in articles please use ncbitaxon:1406)
current name
Paenibacillus polymyxa  (Prazmowski 1880) Ash et al. 1994
includes:
Bacillus sp. NCIM 2726
Bacillus sp. NCIM 2540
Bacillus sp. NCIM 2538
Bacillus sp. RP 2.2
Paenibacillus sp. WLY78
Paenibacillus sp. JCM 8039
Paenibacillus sp. JCM 8038
Paenibacillus sp. JCM 8037
Paenibacillus sp. JCM 8036
Paenibacillus sp. JCM 8035
homotypic synonym:
"Granulobacter polymyxa"  (Prazmowski 1880) Beijerinck 1893 , effective name  1)
Bacillus polymyxa  (Prazmowski 1880) Mace 1889 (Approved Lists 1980)
type strain of Bacillus polymyxa: ATCC : 842 , CCUG : 7426 , CFBP : 4258 , CIP : 66.22 , DSM : 36 , HAMBI : 1897 , HAMBI : 635 , IFO : 15309 , JCM : 2507 , BCCM/LMG : 13294 , NBRC : 15309 , NCCB : 24016 , NCTC : 10343 , NRRL : B-4317 , VKM : B-514 , IAM : 13419 , NCIMB : 8158
"Aerobacillus polymyxa"  (Prazmowski 1880) Donker 1926 , effective name  3)
basionym:
"Clostridium polymyxa"  Prazmowski 1880 , effective name  2)
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales; Paenibacillaceae; Paenibacillus

Notes:

Comments and References:

Ash C et al. (1993)
Ash, C., Priest, F.G., and Collins, M.D. "Molecular identification of rRNA group 3 bacilli (Ash, Farrow, Wallbanks and Collins) using a PCR probe test. Proposal for the creation of a new genus Paenibacillus." Antonie van Leeuwenhoek J. Microbiol. Serol. (1993) 64(3-4):253-260.
JUDICIAL OPINION 77 (2005)
Judicial Commision of the International Committee on Systematics of Prokaryotes: "The type species of the genus Paenibacillus Ash et al. 1994 is Paenibacillus polymyxa. Opinion 77." Int. J. Syst. Evol. Microbiol. (2005) 55:513.
Mace E (1889)
Mace, E. (ed.): Traite Pratique de Bacteriologie, 1st ed. J.B. Balliere & Sons, Paris, (1889). pp.1-711. [No PubMed record available.]
Prazmowski A (1880)
Prazmowski, A. "Untersuchung uber die Entwickelungsgeschichte und Fermentwirking einiger Bacterien-Arten." Inaugural Dissertation. Hugo Voigt, Leipzig (1880). pp.1-58. [No PubMed record available.]
Skerman VBD et al. (1980) (Bacillus polymyxa)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.
Tindall BJ (2000)
Tindall, B.J. "What is the type species of the genus Paenibacillus? Request for an opinion." Int. J. Syst. Evol. Microbiol. (2000) 50:939-940.
VALIDATION LIST No. 51 (1994)
VALIDATION LIST No. 51. Int. J. Syst. Bacteriol. (1994) 44:852. [Erratum: Int. J. Syst. Bacteriol. (1995) 45:201.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Paenibacillus polymyxa type strain (BD-ID 11487) meta-databases BacDive
Paenibacillus polymyxa (Prazmowski 1880) Ash et al. 1994 taxonomy/phylogenetic Encyclopedia of life
GOLD: 38 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Paenibacillus polymyxa culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
2724679205: Paenibacillus polymyxa CCI-25 organism-specific Integrated Microbial Genomes
2728369359: Paenibacillus polymyxa YC0136 organism-specific Integrated Microbial Genomes
2971323301: Paenibacillus polymyxa NCTC 7575 organism-specific Integrated Microbial Genomes
2961925550: Paenibacillus polymyxa CFSAN034343 organism-specific Integrated Microbial Genomes
2907196573: Paenibacillus polymyxa CFSAN034342 organism-specific Integrated Microbial Genomes
2907128583: Paenibacillus polymyxa NCTC 10343 organism-specific Integrated Microbial Genomes
2971428059: Paenibacillus polymyxa CFSAN034341 organism-specific Integrated Microbial Genomes
2938627949: Paenibacillus polymyxa TH2H2 organism-specific Integrated Microbial Genomes
2922670271: Paenibacillus polymyxa TF07-21-d organism-specific Integrated Microbial Genomes
2926330199: Paenibacillus polymyxa CC489 organism-specific Integrated Microbial Genomes
2961961435: Paenibacillus polymyxa LY214 organism-specific Integrated Microbial Genomes
2919361683: Paenibacillus polymyxa BE142 organism-specific Integrated Microbial Genomes
8112414297: Paenibacillus polymyxa DSM 36 organism-specific Integrated Microbial Genomes
2844369829: Paenibacillus polymyxa HY96-2 organism-specific Integrated Microbial Genomes
2744054517: Paenibacillus polymyxa KF-1 organism-specific Integrated Microbial Genomes
2721755693: Paenibacillus polymyxa YC0573 organism-specific Integrated Microbial Genomes
2728369355: Paenibacillus polymyxa J organism-specific Integrated Microbial Genomes
2600255062: Paenibacillus polymyxa WLY78 organism-specific Integrated Microbial Genomes
2630968355: Paenibacillus polymyxa NRRL B-30509 organism-specific Integrated Microbial Genomes
2648501431: Paenibacillus polymyxa YUPP-8 organism-specific Integrated Microbial Genomes
2585427968: Paenibacillus polymyxa DSM 365 organism-specific Integrated Microbial Genomes
2636415923: Paenibacillus polymyxa CF05 organism-specific Integrated Microbial Genomes
2609460170: Paenibacillus polymyxa CICC 10580 organism-specific Integrated Microbial Genomes
2619619307: Paenibacillus polymyxa EBL06 organism-specific Integrated Microbial Genomes
2627853978: Paenibacillus polymyxa Sb3-1 organism-specific Integrated Microbial Genomes
Paenibacillus polymyxa (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Paenibacillus polymyxa type strain (SI-ID 92295) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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