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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 352 372 -
BioSample 805 833 -
GEO DataSets 61 61 -
Gene 8,201 41,569 -
Identical Protein Groups 198,745 203,739 -
Nucleotide 27,131 27,652 118
PubChem BioAssay 24 24 -
PMC 4,827 4,827 -
Protein 688,001 741,973 -
SRA 543 549 -
Structure 163 163 -
Taxonomy 28 28 -

Bacillus amyloliquefaciens

Taxonomy ID: 1390 (for references in articles please use ncbitaxon:1390)
current name
Bacillus amyloliquefaciens  (ex Fukomoto 1943) Priest et al. 1987
type strain of Bacillus amyloliquefaciens: ATCC : 23350 , BCRC : 11601 , CCUG : 28519 , CFBP : 4246 , CIP : 103265 , DSM : 7 , HAMBI : 1824 , IFO : 15535 , BCCM/LMG : 12234 , BCCM/LMG : 9814 , NBRC : 15535 , : , NCIMB : 12077 , NRRL : B-14393 , personal : Fukumoto strain F
homotypic synonym:
Bacillus amyloliquefaciens  (ex Fukumoto 1943) Priest et al. 1987 emend. Wang et al. 2008 , emended name  1)
Bacillus amyloliquefaciens subsp. amyloliquefaciens  (Priest et al. 1987) Borriss et al. 2011
"Bacillus amyloliquifaciens"  (sic) Fukumoto 1943 , effective name  2) , orth. var.  3)
includes:
Bacillus sp. M16(2010)
Bacillus sp. M7(2010)
Bacillus sp. HU1
Bacillus sp. CCF7
Bacillus sp. EnB-bsys5
Bacillus sp. BHR1P1B2
Bacillus sp. BHR3P1B2
Bacillus sp. BTSS3
Bacillus sp. PUE-MAN5
Bacillus sp. 51(2011)
Bacillus sp. 39(2011)
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Caryophanales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus amyloliquefaciens group

Notes:

Comments and References:

Borriss R et al. (2011)
Borriss, R., Chen, X.-H., Rueckert, C., Blom, J., Becker, A., Baumgarth, B., Fan, B., Pukall, R., Schumann, P., Sproer, C., Junge, H., Vater, J., Puhler, A., and Klenk, H.-P. "Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons." Int. J. Syst. Evol. Microbiol. (2011) 61:1786-1801.
Dunlap CA et al. (2015)
Dunlap, C.A., Kim, S.J., Kwon, S.W., and Rooney, A.P. "Phylogenomic analysis shows that Bacillus amyloliquefaciens subsp. plantarum is a later heterotypic synonym of Bacillus methylotrophicus." Int. J. Syst. Evol. Microbiol. (2015) 65:2104-2109.
Dunlap CA et al. (2016)
Dunlap, C.A., Kim, S.-J., Kwon, S.-W., and Rooney, A.P. "Bacillus velezensis is not a later heterotypic synonym of Bacillus amyloliquefaciens; Bacillus methylotrophicus, Bacillus amyloliquefaciens subsp. plantarum and 'Bacillus oryzicola' are later heterotypic synonyms of Bacillus velezensis based on phylogenomics." Int. J. Syst. Evol. Microbiol. (2016) 66:1212-1217.
Fan B et al. (2017)
Fan, B., Blom, J., Klenk, H.-P., and Borriss, R. "Bacillus amyloliquefaciens, Bacillus velezensis, and Bacillus siamensis form an 'Operational Group B. amyloliquefaciens' within the B. subtilis species complex." Front. Microbiol. (2017) 8:22.
Fukumoto J (1943)
Fukumoto, J. "Studies on the production of bacterial amylase. I. Isolation of bacteria secreting potent amylases and their distribution." J. Agric. Chem. Soc. Jpn. (1943) 19:487-503. [No PubMed record available.]
Heyndrickx M et al. (1997)
Heyndrickx, M., Lebbe, L., Vancanneyt, M., Kersters, K., De Vos, P., Logan, N.A., Forsyth, G., Nazli, S., Ali, N., and Berkeley, R.C.W. "A polyphasic reassessment of the genus Aneurinibacillus, reclassification of Bacillus thermoaerophilus (Meier-Stauffer et al. 1996) as Aneurinibacillus thermoaerophilus comb. nov., and emended descriptions of A. aneurinilyticus corrig., and A. migulanus, and A. thermoaerophilus." Int. J. Syst. Bacteriol. (1997) 47:808-817. [No PubMed record available.]
Priest FG et al. (1987)
Priest, F.G., Goodfellow, M., Shute, L.A., and Berkeley, R.C.W. "Bacillus amyloliquefaciens sp. nov., nom. rev." Int. J. Syst. Bacteriol. (1987) 37:69-71. [No PubMed record available.]
Ruiz-Garcia C et al. (2005)
Ruiz-Garcia, C., Bejar, V., Martinez-Checa, F., Llamas, I,. and Quesada, E. "Bacillus velezensis sp. nov., a surfactant-producing bacterium isolated from the river Velez in Malaga, southern Spain." Int. J. Syst. Evol. Microbiol. (2005) 55:191-195. Published online 30 July 2004. doi:10.1099/ijs.0.63310-0. [N.B.: the type strain is listed as CECT 5686 in the abstract, but as CECT 5687 in the body of the text. CECT 5686 is apparently correct, according to the annotation at the CECT.]
Wang LT et al. (2008)
Wang, L.-T., Lee, F.-L., Tai, C.-J., and Kuo, H.-P. "Bacillus velezensis is a later heterotypic synonym of Bacillus amyloliquefaciens." Int. J. Syst. Evol. Microbiol. (2008) 58:671-675.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Bacillus amyloliquefaciens type strain (BD-ID 598) meta-databases BacDive
Bacillus amyloliquefaciens FS1092 organism-specific BioCyc
Bacillus amyloliquefaciens RD7-7 organism-specific BioCyc
Bacillus amyloliquefaciens S499 organism-specific BioCyc
Bacillus amyloliquefaciens HK1 organism-specific BioCyc
Bacillus amyloliquefaciens WS-8 organism-specific BioCyc
Bacillus amyloliquefaciens FS1092 organism-specific BioCyc
Bacillus amyloliquefaciens Y14 organism-specific BioCyc
Bacillus amyloliquefaciens LM2303 organism-specific BioCyc
Bacillus amyloliquefaciens YP6 organism-specific BioCyc
Bacillus amyloliquefaciens YP6 organism-specific BioCyc
Bacillus amyloliquefaciens S499 organism-specific BioCyc
Bacillus amyloliquefaciens LM2303 organism-specific BioCyc
Bacillus amyloliquefaciens FS1092 organism-specific BioCyc
Bacillus amyloliquefaciens LM2303 organism-specific BioCyc
Bacillus amyloliquefaciens HK1 organism-specific BioCyc
Bacillus amyloliquefaciens RD7-7 organism-specific BioCyc
Bacillus amyloliquefaciens S499 organism-specific BioCyc
Bacillus amyloliquefaciens WS-8 organism-specific BioCyc
Bacillus amyloliquefaciens WS-8 organism-specific BioCyc
Bacillus amyloliquefaciens YP6 organism-specific BioCyc
Bacillus amyloliquefaciens Y14 organism-specific BioCyc
Bacillus amyloliquefaciens Y14 organism-specific BioCyc
Bacillus amyloliquefaciens HK1 organism-specific BioCyc
Bacillus amyloliquefaciens RD7-7 organism-specific BioCyc
Bacillus amyloliquefaciens (ex Fukumoto 1943) Priest et al., 1987 taxonomy/phylogenetic Encyclopedia of life
GOLD: 77 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Bacillus amyloliquefaciens culture/stock collections Global Catalogue of Microorganisms
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8008232486: Bacillus amyloliquefaciens WS-8 organism-specific Integrated Microbial Genomes
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2597490283: Bacillus amyloliquefaciens CMW1 organism-specific Integrated Microbial Genomes
2627854195: Bacillus amyloliquefaciens TF28 organism-specific Integrated Microbial Genomes
2597490284: Bacillus amyloliquefaciens X1 organism-specific Integrated Microbial Genomes
2681812862: Bacillus amyloliquefaciens GD4a organism-specific Integrated Microbial Genomes
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2576861802: Bacillus amyloliquefaciens B1895 organism-specific Integrated Microbial Genomes
2684623192: Bacillus amyloliquefaciens MBE1283 organism-specific Integrated Microbial Genomes
2645728097: Bacillus amyloliquefaciens 12B organism-specific Integrated Microbial Genomes
2645727659: Bacillus amyloliquefaciens XK-4-1 organism-specific Integrated Microbial Genomes
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2639763170: Bacillus amyloliquefaciens L-H15 organism-specific Integrated Microbial Genomes
2671180844: Bacillus amyloliquefaciens Bs006 organism-specific Integrated Microbial Genomes
2627854101: Bacillus amyloliquefaciens JJC33M organism-specific Integrated Microbial Genomes
2808606356: Bacillus amyloliquefaciens TE19189 organism-specific Integrated Microbial Genomes
2744054969: Bacillus amyloliquefaciens 11B91 organism-specific Integrated Microbial Genomes
2867919565: Bacillus amyloliquefaciens TECH65 organism-specific Integrated Microbial Genomes
2818991271: Bacillus amyloliquefaciens TE19165 organism-specific Integrated Microbial Genomes
2897127855: Bacillus amyloliquefaciens HK1 organism-specific Integrated Microbial Genomes
2716884864: Bacillus amyloliquefaciens RD7-7 organism-specific Integrated Microbial Genomes
2877768649: Bacillus amyloliquefaciens Y14 organism-specific Integrated Microbial Genomes
2716884205: Bacillus amyloliquefaciens B4140 organism-specific Integrated Microbial Genomes
2716884204: Bacillus amyloliquefaciens Jxnuwx-1 organism-specific Integrated Microbial Genomes
2744054575: Bacillus amyloliquefaciens M49 organism-specific Integrated Microbial Genomes
2660238582: Bacillus amyloliquefaciens JRS8 organism-specific Integrated Microbial Genomes
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Bacillus amyloliquefaciens taxonomy/phylogenetic Lifemap
Bacillus amyloliquefaciens type strain (SI-ID 1093) meta-databases StrainInfo, Leibniz Institute DSMZ
Bacillus amyloliquefaciens (ex Fukomoto, 1943) Priest, Goodfellow, Shute & Berkeley, 1987 taxonomy/phylogenetic World Register of Marine Species
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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