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Taxonomy browser (Enterococcus faecium)

Enterococcus faecium

Taxonomy ID: 1352 (for references in articles please use NCBI:txid1352)

Scientific name: Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Balz 1984

type strain of Enterococcus faecium: ATCC:19434
type strain of Enterococcus faecium: CCUG:542
type strain of Enterococcus faecium: CFBP:4248
type strain of Enterococcus faecium: CIP:103014
type strain of Enterococcus faecium: DSM:20477
type strain of Enterococcus faecium: HAMBI:1710
type strain of Enterococcus faecium: JCM:5804
type strain of Enterococcus faecium: JCM:8727
type strain of Enterococcus faecium: BCCM/LMG:11423
type strain of Enterococcus faecium: NBRC:100485
type strain of Enterococcus faecium: NBRC:100486
type strain of Enterococcus faecium: NCDO:942
type strain of Enterococcus faecium: NCIMB:11508
type strain of Enterococcus faecium: NCTC:7171

homotypic synonym: Streptococcus faecium Orla-Jensen 1919 (Approved Lists 1980), nom. approb.¹⁾

Inherited blast name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage( full ): cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus

Entrez records
Database name	Subtree links	Direct links
Nucleotide	444,677	380,193
Nucleotide GSS	4	2
Protein	2,911,140	2,200,098
Structure	50	40
Genome	1	1
Popset	347	347
GEO Datasets	116	104
PubMed Central	7,120	7,120
Gene	10,149	622
SRA Experiments	9,451	8,865
Protein Clusters	5,337	5,337
Identical Protein Groups	248,899	219,054
Bio Project	558	244
Bio Sample	10,403	9,927
Bio Systems	904	-
Assembly	1,283	978
Probe	73	71
PubChem BioAssay	1,261	1,261
Taxonomy	361	1

Notes:

1) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.

Comments and References:

Schleifer KH & Kilpper-Balz R (1984): Schleifer, K.H., and Kilpper-Balz, R. "Transfer of Streptococcus faecalis and Streptococcus faecium to the genus Enterococcus nom. rev. as Enterococcus faecalis comb. nov. and Enterococcus faecium comb. nov." Int. J. Syst. Bacteriol. (1984) 34:31-34. [NoPubMed record available.]

Skerman VBD et al. (1980) (Streptococcus faecium): Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.

Genome Information

Trace records (raw single-pass reads of DNA sequence)
Sequencing Center Name
Record counts per type
454	WGS	ALL
BCM - Baylor College of Medicine
410,138	-	410,138
BI - Broad Insititute
-	4,992	4,992
JGI - Joint Genome Institute, U.S. Department of Energy
-	106,707	106,707
Totals per type
410,138	111,699	521,837

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Enterococcus faecium	meta-databases	BacDive
4 records from this provider	organism-specific	BioCyc
Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-BA%A4lz 1984	taxonomy/phylogenetic	Encyclopedia of life
65 records from this provider	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Enterococcus faecium	culture/stock collections	Global Catalogue of Microorganisms
Related Immune Epitope Information	gene/protein/disease-specific	Immune Epitope Database and Analysis Resource
117 records from this provider	organism-specific	Integrated Microbial Genomes
Enterococcus faecium	taxonomy/phylogenetic	Lifemap
Enterococcus faecium (taxon passport)	culture/stock collections	StrainInfo
Wikipedia	taxonomy/phylogenetic	iPhylo

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Comments and questions to info@ncbi.nlm.nih.gov

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