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Taxonomy browser (Enterococcus faecium)

Enterococcus faecium

Taxonomy ID: 1352 (for references in articles please use NCBI:txid1352)
current name
Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Balz 1984
basionym:
Streptococcus faecium Orla-Jensen 1919 (Approved Lists 1980), nom. approb. 1) in [Skerman VBD et al. (1980)]
type strain of Streptococcus faecium: ATCC:19434, CCUG:542, CFBP:4248, CIP:103014, DSM:20477, HAMBI:1710, JCM:5804, JCM:8727, BCCM/LMG:11423, NBRC:100485, NBRC:100486, NCDO:942, NCIMB:11508, NCTC:7171, NCFB:942
includes:
Enterococcus sp. LMG 19843
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 1,191,412 1,124,078 224
Protein 6,137,219 5,426,890 -
Structure 101 87 -
Conserved Domains 1 - -
GEO Datasets 166 116 -
PubMed Central 19,677 19,677 -
Gene 19,148 6,747 -
SRA Experiments 42,813 42,141 -
Protein Clusters 5,337 5,337 -
Identical Protein Groups 1,254,854 1,231,635 -
BioProject 1,364 1,042 -
BioSample 50,830 50,266 12
Datasets Genome 34,020 33,655 -
Genetic Testing Registry 3 3 -
PubChem BioAssay 1,986 1,986 -
Taxonomy 361 1 -

Notes:

Comments and References:
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Belloso Daza MV et al. (2021), doi:10.1099/ijsem.0.004948
Belloso Daza, M.V., Cortimiglia, C., Bassi, D., and Cocconcelli, P.S. "Genome-based studies indicate that the Enterococcus faecium Clade B strains belong to Enterococcus lactis species and lack of the hospital infection associated markers." Int. J. Syst. Evol. Microbiol. (2021) 71(8):004948.
Schleifer KH & Kilpper-Balz R (1984)
Schleifer, K.H., and Kilpper-Balz, R. "Transfer of Streptococcus faecalis and Streptococcus faecium to the genus Enterococcus nom. rev. as Enterococcus faecalis comb. nov. and Enterococcus faecium comb. nov." Int. J. Syst. Bacteriol. (1984) 34(1):31-34. [NoPubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Enterococcus faecium meta-databases BacDive - Free access to bacterial information database
271 records from this provider organism-specific BioCyc
Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-BA%A4lz 1984 taxonomy/phylogenetic Encyclopedia of life
GOLD: 1377 Organisms organism-specific Genomes On Line Database
Enterococcus faecium culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
235 records from this provider organism-specific Integrated Microbial Genomes
Enterococcus faecium taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Enterococcus faecium | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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