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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 5 159 -
BioSample 11 5,932 -
Conserved Domains 3 3 -
GEO DataSets - 3 -
Gene - 20,175 -
Identical Protein Groups 5 2,442,801 -
Nucleotide 1 444,355 1,890
PMC 467 1,304 -
Protein 5 774,979 -
SRA 3 152 -
Structure - 20 -
Taxonomy 322 322 -

Planctomycetaceae

Taxonomy ID: 126 (for references in articles please use ncbitaxon:126)
current name
Planctomycetaceae  Schlesner and Stackebrandt 1987 emend. Dedysh et al. 2020 , emended name  3) in [Dedysh SN et al. (2020)]
homotypic synonym:
Planctomycetaceae  Schlesner and Stackebrandt 1987 emend. Scheuner et al. 2014 , emended name  1)
Planctomycetaceae  Schlesner and Stackebrandt 1987 emend. Ward 2011 , emended name  2)
Planctomycetaceae  Schlesner and Stackebrandt 1987
NCBI BLAST name: planctomycetes
Rank: family
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; PVC group; Planctomycetota; Planctomycetia; Planctomycetales

Notes:

Comments and References:

Dedysh SN et al. (2020) , Pubmed: abstract
Dedysh, S.N., Kulichevskaya, I.S., Beletsky, A.V., Ivanova, A.A., Rijpstra, W.I.C., Damsté, J.S.S., Mardanov, A.V., and Ravin, N.V. "Lacipirellula parvula gen. nov., sp. nov., representing a lineage of planctomycetes widespread in low-oxygen habitats, description of the family Lacipirellulaceae fam. nov. and proposal of the orders Pirellulales ord. nov., Gemmatales ord. nov. and Isosphaerales ord. nov." Syst. Appl.Microbiol. (2020) 43(1):126050.
Euzeby JP & Kudo T (2001)
Euzeby, J.P., and Kudo, T. "Corrigenda to the Validation Lists." Int. J. Syst. Evol. Microbiol. (2001) 51(5):1933-1938.
Lindsay MR et al. (2001)
Lindsay, M.R., Webb, R.I., Strous, M., Jetten, M.S., Butler, M.K., Forde, R.J., and Fuerst, J.A. "Cell compartmentalisation in planctomycetes: novel types of structural organisation for the bacterial cell." Arch. Microbiol. (2001) 175:413-429.
List of Changes in Taxonomic Opinion No. 22 (2015)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2015) 65:2028-2029.
Scheuner C et al. (2014)
Scheuner, C., Tindall, B.J., Lu, M., Nolan, M., Lapidus, A., Cheng, J.-F., Goodwin, L., Pitluck, S., Huntemann, M., Liolios, K., Pagani, I., Mavromatis, K., Ivanova, N., Pati, A., Chen, A., Palaniappan, K., Jeffries, C.D., Hauser, L., Land, M., Mwirichia, R., Rohde, M., Abt, B., Detter, J.C., Woyke, T., Eisen, J.A., Markowitz, V., Hugenholtz, P., Göker, M., Kyrpides, N.C., and Klenk, H.-P. "Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305(T)), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae." Stand. Genomic Sci. (2014) 9:10.
Schlesner H & Stackebrandt E (1986)
Schlesner, H., and Stackebrandt, E. "Assignment of the genera Planctomyces and Pirella to a new family Planctomycetaceae fam. nov. and description of the order Planctomycetales ord. nov." Syst. Appl. Microbiol. (1986) 8:174-176. [No PubMed record available.]
VALIDATION LIST No. 23 (1987)
VALIDATION LIST No. 23. Int. J. Syst. Bacteriol. (1987) 37(2):179-180.
VALIDATION LIST No. 26 (1988)
VALIDATION LIST No. 26. Int. J. Syst. Bacteriol. (1988) 38:328-329.
Ward NL (2011d)
Ward, N.L. "Family I. Planctomycetaceae Schlesner and Stackebrandt 1987, 179VP (Effective publication: Schlesner and Stackebrandt 1986, 175) emend. Ward (this volume)." In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 4 (The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyglomi, Gemmatimonadetes, Lentisphaerae, Verrumicrobia, Chlamydiae, and Planctomycetes) (N.R. Krieg, J.T. Staley, D.R. Brown, B.P. Hedlund, B.J. Paster, N.L. Ward, W. Ludwig, and W.B. Whitman, eds.), Springer-Verlag, New York (2011). pp. 880-881. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Planctomycetaceae taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2811994942: unclassified Planctomycetaceae BinDmb35 organism-specific Integrated Microbial Genomes
2814122920: unclassified Planctomycetacea BinUASBm11 organism-specific Integrated Microbial Genomes
2811994953: unclassified Planctomycetacea BinDmb29 organism-specific Integrated Microbial Genomes
2811994888: unclassified Planctomycetacea BinDmb206 organism-specific Integrated Microbial Genomes
2811994914: unclassified Planctomycetaceae BinDm120 organism-specific Integrated Microbial Genomes
2808606352: unclassified Planctomycetacea BinDm144 organism-specific Integrated Microbial Genomes
2808606440: unclassified Planctomycetaceae BinDmb3 organism-specific Integrated Microbial Genomes
2808606351: unclassified Planctomycetaceae BinDmb253 organism-specific Integrated Microbial Genomes
2814122906: unclassified Planctomycetacea BinDmb173 organism-specific Integrated Microbial Genomes
2818991414: unclassified Planctomycetaceae BinDmb56 organism-specific Integrated Microbial Genomes
2806311044: unclassified Planctomycetaceae BinDmb100 organism-specific Integrated Microbial Genomes
2811994954: unclassified Planctomycetacea BinDmb48 organism-specific Integrated Microbial Genomes
2814122909: unclassified Planctomycetacea BinDmb145 organism-specific Integrated Microbial Genomes
2772190790: unclassified Planctomycetaceae BinDmb104 organism-specific Integrated Microbial Genomes
2818991415: unclassified Planctomycetacea BinDmb257 organism-specific Integrated Microbial Genomes
2772190792: unclassified Planctomycetaceae BinDmb81 organism-specific Integrated Microbial Genomes
2814122935: unclassified Planctomycetacea BinDGm83 organism-specific Integrated Microbial Genomes
2811994886: unclassified Planctomycetaceae BinDmb254 organism-specific Integrated Microbial Genomes
2770939646: unclassified Planctomycetaceae BinDmb241 organism-specific Integrated Microbial Genomes
2808606350: unclassified Planctomycetaceae BinDmb43 organism-specific Integrated Microbial Genomes
2772190791: unclassified Planctomycetaceae BinDmb278 organism-specific Integrated Microbial Genomes
2814122933: unclassified Planctomycetaceae BinDm81 organism-specific Integrated Microbial Genomes
2695420978: unclassified Planctomycetaceae bin 8 organism-specific Integrated Microbial Genomes
2695420972: Kelp biofilm associated Planctomycetes bin 2 organism-specific Integrated Microbial Genomes
2695420974: unclassified Planctomycetaceae bin 4 organism-specific Integrated Microbial Genomes
2651870065: unclassified Planctomycetaceae Bin 56 organism-specific Integrated Microbial Genomes
2651870071: unclassified Planctomycetaceae Bin 56-2 organism-specific Integrated Microbial Genomes
2651870066: unclassified Planctomycetaceae Bin 32 organism-specific Integrated Microbial Genomes
2695420973: unclassified Planctomycetaceae bin 3 organism-specific Integrated Microbial Genomes
2695420975: unclassified Planctomycetaceae bin 5 organism-specific Integrated Microbial Genomes
2651870068: unclassified Planctomycetaceae Bin 63 organism-specific Integrated Microbial Genomes
2651870067: unclassified Planctomycetaceae Bin 56-1 organism-specific Integrated Microbial Genomes
2695420976: unclassified Planctomycetaceae bin 6 organism-specific Integrated Microbial Genomes
2651870070: unclassified Planctomycetaceae Bin 63-1 organism-specific Integrated Microbial Genomes
2651870064: unclassified Planctomycetaceae Bin 20 organism-specific Integrated Microbial Genomes
2695420977: unclassified Planctomycetaceae bin 7 organism-specific Integrated Microbial Genomes
2695420971: Kelp biofilm associated Planctomycetes bin 1 organism-specific Integrated Microbial Genomes
2651870069: unclassified Planctomycetaceae Bin 63-2 organism-specific Integrated Microbial Genomes
2693429805: unclassified Planctomycetaceae Bin 22 organism-specific Integrated Microbial Genomes
2623620407: Plantomycetaceae sp. genome_bin_12 organism-specific Integrated Microbial Genomes
2770939651: unclassified Planctomycetaceae BinDmb22 organism-specific Integrated Microbial Genomes
Planctomycetaceae taxonomy/phylogenetic Lifemap
LBSN taxonomy/phylogenetic List of Bacterial names with Standing in Nomenclature
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Planctomycetaceae taxonomy/phylogenetic Ocean Biogeographic Information System
Planctomycetaceae | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Planctomycetaceae taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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