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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 21 23 -
BioSample 54 57 -
Gene 4,560 8,930 -
Identical Protein Groups 26,178 26,452 -
Nucleotide 9,355 9,896 288
PMC 100 100 -
Protein 36,651 37,329 -
SRA 17 17 -
Taxonomy 3 3 -

Sphingobium xenophagum

Taxonomy ID: 121428 (for references in articles please use ncbitaxon:121428)
current name
Sphingobium xenophagum  (Stolz et al. 2000) Pal et al. 2006
includes:
Sphingomonas sp. BN6
Sphingomonas sp. str. BN6
Sphingomonas sp. OW59
Sphingomonas sp. NBRC 101067
Sphingomonas sp. NBRC 101068
Sphingomonas sp. NBRC 101089
basionym:
Sphingomonas xenophaga  Stolz et al. 2000
type strain of Sphingomonas xenophaga: CIP : 107206 , DSM : 6383 , personal : BN6 , NBRC : 107872
homotypic synonym:
Sphingobium xenophagum  (Stolz et al. 2000) Pal et al. 2006 emend. Feng et al. 2019 , emended name  1) in [Feng GD et al. (2019)]
NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym Sphingobium hydrophobicum  Chen et al. 2016
type strain of Sphingobium hydrophobicum: personal : C1 , CCTCC : AB 2015198 , KCTC : 42740
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingobiaceae; Sphingobium

Notes:

Comments and References:
Feng GD et al. (2019) , Pubmed: abstract
Feng, G.-D., Chen, M.-B., Zhang, X.-J., Wang, D.-D., and Zhu, H.-H. "Whole genome sequences reveal the presence of 11 heterotypic synonyms in the genus Sphingobium and emended descriptions of Sphingobium indicum, Sphingobium fuliginis, Sphingobium xenophagum and Sphingobium cupriresistens." Int. J Syst. Evol. Microbiol. (2019) 69(7):2161-2165. [Erratum: Int. J. Syst. Evol. Microbiol. (2019) 69(12):3985.]
Chen X et al. (2016c)
Chen, X., Wang, H., Xu, J., Song, D., Sun, G., and Xu, M. "Sphingobium hydrophobicum sp. nov., a hydrophobic bacterium isolated from electronic-waste-contaminated sediment." Int. J. Syst. Evol. Microbiol. (2016) 66:3912-3916.
Feng GD et al. (2019)
Feng, G.-D., Chen, M.-B., Zhang, X.-J., Wang, D.-D., and Zhu, H.-H. "Whole genome sequences reveal the presence of 11 heterotypic synonyms in the genus Sphingobium and emended descriptions of Sphingobium indicum, Sphingobium fuliginis, Sphingobium xenophagum and Sphingobium cupriresistens." Int. J Syst. Evol. Microbiol. (2019) 69(7):2161-2165. [Erratum: Int. J. Syst. Evol. Microbiol. (2019) 69(12):3985.]
Pal R et al. (2006)
Pal, R., Bhasin, V.K., and Lal, R. "Proposal to reclassify [Sphingomonas] xenophaga Stolz et al. 2000 and [Sphingomonas] taejonensis Lee et al. 2001 as Sphingobium xenophagum comb. nov. and Sphingopyxis taejonensis comb. nov., respectively." Int. J. Syst. Evol. Microbiol. (2006) 56:667-670. Published online 11 November 2005. doi:10.1099/ijs.0.64161-0
Stolz A et al. (2000)
Stolz, A., Schmidt-Maag, C., Denner, E.B.M., Busse, H.J., Egli, T., and Kampfer, P. "Description of Sphingomonas xenophaga sp. nov. for strains BN6T and N,N which degrade xenobiotic aromatic compounds." Int. J. Syst. Evol. Microbiol. (2000) 50:35-41.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Sphingobium xenophagum type strain (BD-ID 14168) meta-databases BacDive
Sphingobium xenophagum (Stolz et al. 2000) Pal et al. 2006 taxonomy/phylogenetic Encyclopedia of life
GOLD: 2 Organisms organism-specific Genomes On Line Database
Sphingobium xenophagum culture/stock collections Global Catalogue of Microorganisms
2775506977: Sphingobium xenophagum C1 organism-specific Integrated Microbial Genomes
2919709256: Sphingobium xenophagum 4256 organism-specific Integrated Microbial Genomes
Sphingobium xenophagum type strain (SI-ID 48173) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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