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Taxonomy browser (Epicoccum nigrum)

Epicoccum nigrum

Taxonomy ID: 105696 (for references in articles please use NCBI:txid105696)
current name
Epicoccum nigrum Link, 1816
Epicoccum sp. SGSGf34
NCBI BLAST name: ascomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic synonym
Epicoccum purpurascens Ehrenb. ex Schltdl., 1824
heterotypic synonym
Phoma epicoccina Punith., M.C. Tulloch & C.M. Leach, 1972
culture from holotype of Phoma epicoccina: CBS:173.73
type material of Phoma epicoccina: ATCC:24428, IMI:164070
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; dothideomyceta; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Didymellaceae; Epicoccum
   Entrez records   
Database name Subtree links Direct links
Nucleotide 2,491 2,490
Protein 22,567 22,567
Genome 1 1
Popset 257 257
PubMed Central 677 677
SRA Experiments 11 9
Identical Protein Groups 21,478 21,478
BioProject 8 7
BioSample 22 21
Assembly 3 2
Taxonomy 2 1

Comments and References:

Hou L et al. (2020), doi:10.1016/j.simyco.2020.05.001
Hou L, Groenewald J, Pfenning L, Yarden O, Crous P, Cai L. 2020. The phoma-like dilemma. Studies in Mycology 96:309-396.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
GOLD: Go0372971 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2 records from this provider culture/stock collections Global Catalogue of Microorganisms
Epicoccum nigrum Link 1815 taxonomy/phylogenetic Index Fungorum
Epicoccum nigrum Link taxonomy/phylogenetic MycoBank
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Epicoccum nigrum taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
2 records from this provider taxonomy/phylogenetic World Register of Marine Species
2 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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