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Taxonomy browser (Human alphaherpesvirus 1)

Human alphaherpesvirus 1 1)

Taxonomy ID: 10298 (for references in articles please use NCBI:txid10298)
current name
Human alphaherpesvirus 1, ICTV accepted 1)
Human herpesvirus type 1
herpes simplex virus 1 HSV-1
herpes simplex virus HSV-1
herpes simplex virus type 1 HSV-1
herpes simplex virus type 1 HSV1
herpes simplex virus type-1 HSV-1
Genbank common name: Herpes simplex virus type 1
NCBI BLAST name: viruses
Rank: species
Genetic code: Translation table 1 (Standard)
Host: human|vertebrates
Other names:
heterotypic synonym
Herpes simplex virus 1
heterotypic synonym
Human herpesvirus 1
Lineage( full )
Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus
   Entrez records   
Database name Subtree links Direct links
Nucleotide 9,578 9,554
Protein 36,279 35,446
Structure 111 35
Genome 1 1
Popset 98 98
GEO Datasets 590 544
PubMed Central 5,925 5,925
Gene 128 128
SRA Experiments 1,041 958
Protein Clusters 77 77
Identical Protein Groups 8,879 8,642
BioProject 83 70
BioSample 639 561
Assembly 108 101
PubChem BioAssay 2,013 1,759
Taxonomy 18 1


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External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Human herpesvirus 1 taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0084758 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
638276208: Human herpesvirus 1 organism-specific Integrated Microbial Genomes
Human herpesvirus 1 taxonomy/phylogenetic International Committee on Taxonomy of Viruses
2 records from provider dna/protein sequence VirOligo Compilation Lab
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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