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Taxonomy browser (Rattus rattus)

Rattus rattus

Taxonomy ID: 10117 (for references in articles please use NCBI:txid10117)
Scientific name: Rattus rattus (Linnaeus, 1758)
Genbank common name: black rat
Inherited blast name: rodents
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
synonym: Rattus rattoides (Pictet & Pictet, 1844)
common name: house rat
common name: roof rat
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
   Entrez records   
Database name Subtree links Direct links
Nucleotide 2,930 2,652
Protein 1,430 1,186
Structure 57 57
Genome 1 1
Popset 69 69
GEO Datasets 116 116
PubMed Central 1,160 1,160
Gene 13 13
SRA Experiments 245 245
GEO Profiles 31,099 31,099
Protein Clusters 13 13
Identical Protein Groups 612 579
Bio Project 16 16
Bio Sample 1,361 1,361
Probe 1,710 1,710
Taxonomy 9 1

Comments and References:

The laboratory rat (Rattus norvegicus) is occassionally misidentified as Rattus rattus in sequence submissions. Many of the sequence entries listed here are likely to have come from Rattus norvegicus.


Genome Information

Go to NCBI genomic BLAST page for Rattus rattus

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Rattus rattus taxonomy/phylogenetic Animal Diversity Web
2 records from this provider taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Rattus rattus taxonomy/phylogenetic Barcodes of Life
3 records from this provider supplemental materials Dryad Digital Repository
Rattus rattus (Linnaeus, 1758) taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Rattus rattus (Linnaeus, 1758) taxonomy/phylogenetic Integrated Taxonomic Information System
Rattus rattus taxonomy/phylogenetic Lifemap
Rattus rattus Linnaeus 1758 taxonomy/phylogenetic Mammal Species of the World
MamTex taxonomy/phylogenetic Mammals of Texas
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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