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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 8,251 8,263 -
BioSample 225,099 225,455 -
Conserved Domains 5 5 -
GEO DataSets 165,742 165,764 -
Gene 121,373 121,373 -
Identical Protein Groups 106,184 106,186 -
Nucleotide 2,378,440 2,378,444 -
PubChem BioAssay 205,856 205,856 -
PMC 18,621 18,621 -
Protein 178,083 178,085 -
SRA 159,993 160,397 -
Structure 4,470 4,470 -
Taxonomy 2 2 -

Rattus norvegicus

Taxonomy ID: 10116 (for references in articles please use NCBI:txid10116)
current name
Rattus norvegicus
includes:
Buffalo rat
Rattus PC12 clone IS
Sprague-Dawley rat
Wistar rats
laboratory rat
zitter rats
Rattus sp. strain Wistar
basionym:
Mus norvegicus  Berkenhout, 1769
type material of Mus norvegicus: USNM : 125212
Genbank common name: Norway rat
NCBI BLAST name: rodents
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
common name(s) brown rat, rats, rat

Lineage(full)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus

Comments and References:

image:Rattus norvegicus
Image by AnemoneProjectors from Wikimedia Commons under a CC BY-SA 2.0 license.
* Image may not have been verified for accuracy by NCBI Taxonomy.
Note: The laboratory rat Rattus norvegicus is occassionally misidentified as Rattus rattus. A certain number of the R. rattus sequence records are therefore likely to be from R. norvegicus. Sequence entries that are identified only by the English vernacular name "rats" are classified with "Rattus sp." Many of these entries are journal-scanned sequences from articles in which the scientific name of the organism does not appear (this is an editorial policy for model organisms in some journals). Most of these sequences are likely to be from Rattus norvegicus. If you want to make sure that you have all of the records for R. norvergicus, you should also retrieve the records for Rattus rattus and Rattus sp.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Rattus norvegicus taxonomy/phylogenetic Animal Diversity Web
Rattus norvegicus with GenBank sequence accessions taxonomy/phylogenetic Arctos Specimen Database
Rattus norvegicus taxonomy taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Rattus norvegicus taxonomy/phylogenetic Barcodes of Life
Rattus norvegicus taxonomy/phylogenetic CalPhotos
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
Rattus norvegicus (Berkenhout, 1769) taxonomy/phylogenetic Encyclopedia of life
GOLD: 10 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
639431600: Rattus norvegicus BN/SsNHsdMCW organism-specific Integrated Microbial Genomes
Rattus norvegicus (Berkenhout, 1769) taxonomy/phylogenetic Integrated Taxonomic Information System
Rattus norvegicus taxonomy/phylogenetic Lifemap
Rattus norvegicus Berkenhout 1769 taxonomy/phylogenetic Mammal Species of the World
MamTex taxonomy/phylogenetic Mammals of Texas
Rat Genome Data (Jackson Lab) taxonomy/phylogenetic NCBI taxonomy bookmarks
RATMAP taxonomy/phylogenetic NCBI taxonomy bookmarks
Rat Genome Database (Medical College of Wisconsin) taxonomy/phylogenetic NCBI taxonomy bookmarks
rat strains (BAC proposal) taxonomy/phylogenetic NHGRI genome proposal white papers
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Mus norvegicus Berkenhout, 1769 taxonomy/phylogenetic Ocean Biogeographic Information System
Rattus norvegicus (Berkenhout, 1759) taxonomy/phylogenetic Ocean Biogeographic Information System
Rattus norvegicus taxonomy/phylogenetic TreeBase
UCSCgb sequence screening/similarity/alignment UCSC Genome Browser
WebScipio: Rattus norvegicus BN/SsNHsdMCW organism-specific WebScipio - eukaryotic gene identification
WebScipio: Rattus norvegicus organism-specific WebScipio - eukaryotic gene identification
Rattus norvegicus (Berkenhout, 1759) taxonomy/phylogenetic World Register of Marine Species
Mus norvegicus Berkenhout, 1769 taxonomy/phylogenetic World Register of Marine Species
diArk: Rattus norvegicus organism-specific diArk - a resource for eukaryotic genome research
diArk: Rattus norvegicus SHRSP/Bbb organism-specific diArk - a resource for eukaryotic genome research
diArk: Rattus norvegicus WKY/Bbb organism-specific diArk - a resource for eukaryotic genome research
diArk: Rattus norvegicus SS/JrNhsd organism-specific diArk - a resource for eukaryotic genome research
diArk: Rattus norvegicus GK/Ox organism-specific diArk - a resource for eukaryotic genome research
diArk: Rattus norvegicus BN/SsNHsdMCW organism-specific diArk - a resource for eukaryotic genome research
diArk: Rattus norvegicus BN/Sprague-Dawley organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
BBC Wildlife Finder taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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