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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 99,412 99,855 -
BioSample 2,874,892 2,889,421 -
Conserved Domains 22 22 -
GEO DataSets 2,544,547 2,545,580 -
Gene 251,759 251,854 -
Identical Protein Groups 263,670 266,585 -
Nucleotide 10,582,390 11,193,458 -
PubChem BioAssay 233,491 233,495 -
PMC 42,239 42,646 -
Protein 381,994 391,809 -
SRA 2,895,085 2,910,004 -
Structure 10,120 10,127 -
Taxonomy 18 18 -

Mus musculus

Taxonomy ID: 10090 (for references in articles please use NCBI:txid10090)
current name
Mus musculus  Linnaeus, 1758
includes:
LK3 transgenic mice
Mus sp. 129SV
nude mice
transgenic mice
Balb/c mouse
Genbank common name: house mouse
NCBI BLAST name: rodents
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
common name(s) mouse

Lineage(full)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus

Comments and References:

image:Mus musculus
Image by Ilmari Karonen from Wikimedia Commons under a Public Domain license.
* Image may not have been verified for accuracy by NCBI Taxonomy.
Note: Some journals identify organisms only with vernacular names like "mouse" or "rats". Currently, an organism idenitified as "mouse" will be found under the name "Mus sp." although we are aware that most of the corresponding sequence records are likely to be from "Mus musculus". If it is important to see all records for "Mus musculus", you should therefore consider retrieving the records for "Mus sp." as well.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mus musculus taxonomy/phylogenetic Animal Diversity Web
Mus musculus LinnA%A6us, 1758 taxonomy/phylogenetic AnimalBase
Mus musculus LinnA%A6us, 1758 taxonomy/phylogenetic AnimalBase
Mus musculus taxonomy taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Mus musculus taxonomy/phylogenetic Barcodes of Life
DigiMorph images Digital Morphology
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Mus musculus Linnaeus, 1758 taxonomy/phylogenetic Encyclopedia of life
GOLD: 31 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
639370800: Mus musculus C57BL/6J organism-specific Integrated Microbial Genomes
Mus musculus Linnaeus, 1758 taxonomy/phylogenetic Integrated Taxonomic Information System
Mus musculus taxonomy/phylogenetic Lifemap
Mus musculus Linnaeus 1758 taxonomy/phylogenetic Mammal Species of the World
MamTex taxonomy/phylogenetic Mammals of Texas
Coat Colors of Mice (WK Silvers) taxonomy/phylogenetic NCBI taxonomy bookmarks
Mouse Genome Informatics (Jackson Lab) taxonomy/phylogenetic NCBI taxonomy bookmarks
house mouse strains (BAC proposal) taxonomy/phylogenetic NHGRI genome proposal white papers
male mouse (BAC proposal) taxonomy/phylogenetic NHGRI genome proposal white papers
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Mus musculus Linnaeus, 1758 taxonomy/phylogenetic Ocean Biogeographic Information System
UCSCgb sequence screening/similarity/alignment UCSC Genome Browser
WebScipio: Mus musculus organism-specific WebScipio - eukaryotic gene identification
WebScipio: Mus musculus str. mixed organism-specific WebScipio - eukaryotic gene identification
Mus musculus Linnaeus, 1758 taxonomy/phylogenetic World Register of Marine Species
diArk: Mus musculus C57BL/6NJ organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus DBA/2J organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus NZO/HiLtJ organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus 129S1/SvImJ organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus A/J organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus NOD/ShiLtJ organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus AKR/J organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus str. mixed organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus C3H/HeJ organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus 129Sv/Jae organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus BALB/cJ organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus MSM/Ms organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus CBA/J organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus LP/J organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus FVB/NJ organism-specific diArk - a resource for eukaryotic genome research
diArk: Mus musculus C57BL/6J organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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