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Taxonomy browser (Pedobacter heparinus)

Pedobacter heparinus

Taxonomy ID: 984 (for references in articles please use NCBI:txid984)
current name
Pedobacter heparinus (Payza and Korn 1956) Steyn et al. 1998 emend. Zhou et al. 2012
type strain of Pedobacter heparinus: ATCC:13125, CCUG:12810, CIP:104194, CIP:105498, DSM:2366, IFO:12017, JCM:7457, BCCM/LMG:10339, BCCM/LMG:4024, NBRC:12017, NCIMB:9290, NRRL:B-14731
homotypic synonym:
Flavobacterium heparinum Payza and Korn 1956 (Approved Lists 1980), nom. approb. 1)
Cytophaga heparina (Payza and Korn 1956) Christensen 1980
Sphingobacterium heparinum (Payza and Korn 1956) Takeuchi and Yokota 1993
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 176 158 19
Protein 12,453 7,749 -
Structure 23 18 -
Popset 2 2 -
GEO Datasets 3 - -
PubMed Central 562 562 -
Gene 4,341 1 -
SRA Experiments 13 1 -
Protein Clusters 2,974 2,974 -
Identical Protein Groups 9,571 7,787 -
BioProject 6 2 -
BioSample 7 2 2
Assembly 3 1 -
Taxonomy 2 1 -

Notes:

Comments and References:

Christensen P (1980b)
Christensen, P. "Description and taxonomic status of Cytophaga heparina (Payza and Korn) comb. nov. (Basionym: Flavobacterium heparinum Payza and Korn 1956)." Int. J. Syst. Bacteriol. (1980) 30:473-475. [No PubMed record available.]
Payza AN & Korn ED (1956)
Payza, A.N., and Korn, E.D. "Bacterial degradation of heparin." Nature (Lond.) (1956) 177:88-89. [No abstract available.]
Skerman VBD et al. (1980) (Flavobacterium heparinum)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Steyn PL et al. (1998)
Steyn, P.L., Segers, P., Vancanneyt, M., Sandra, P., Kersters, K., and Joubert, J.J. "Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. proposal of the family Sphingobacteriaceae fam. nov." Int. J. Syst. Bacteriol. (1998) 48:165-177.
Takeuchi M & Yokota A (1992)
Takeuchi, M., and Yokota A. "Proposals of Sphingobacterium faecium sp. nov., Sphingobacterium piscium sp. nov., Sphingobacterium heparinum comb. nov., Sphingobacterium thalpophilum comb. nov., and two genospecies of the genus Sphingobacterium and synonymy of Flavobacterium yabuuchiae and Sphingobacterium spiritivorum." J. Gen. Appl. Microbiol. (1992) 38:465-482. [No PubMed record available.]
VALIDATION LIST No. 47 (1993) (Sphingobacterium heparinum)
VALIDATION LIST No. 47. Int. J. Syst. Bacteriol. (1993) 43:864-865.
Zhou Z et al. (2012b)
Zhou, Z., Jiang, F., Wang, S., Peng, F., Dai, J., Li, W., and Fang, C. "Pedobacter arcticus sp. nov., a facultative psychrophile isolated from Arctic soil and emended descriptions of the genus Pedobacter, Pedobacter heparinus, Pedobacter daechungensis, Pedobacter terricola, Pedobacter glucosidilyticus and Pedobacter lentus." Int. J. Syst. Evol. Microbiol. (2012) 62:1963-1969.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pedobacter heparinus meta-databases BacDive
Flavobacterium heparinum Payza and Korn 1956 (Approved Lists 1980). taxonomy/phylogenetic Encyclopedia of life
Pedobacter heparinus culture/stock collections Global Catalogue of Microorganisms
Pedobacter heparinus (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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