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Taxonomy browser (Xanthomonas hortorum pv. gardneri)

Xanthomonas hortorum pv. gardneri

Taxonomy ID: 2754056 (for references in articles please use NCBI:txid2754056)
current name
Xanthomonas hortorum pv. gardneri Morinière et al. 2020 in [Morinière L et al. (2020)]
NCBI BLAST name: g-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Xanthomonas gardneri (ex Sutic 1957) Jones et al. 2006
type strain of Xanthomonas gardneri: ATCC:19865, DSM:19127, ICMP:16689, NCPPB:881
basionym:
"Pseudomonas gardneri" Sutic 1957, effective name 1)
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas hortorum
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 6,477 5,354 -
Protein 75,502 70,059 -
Structure 2 - -
Genome 1 1 -
Popset 57 57 -
PubMed Central 73 73 -
Gene 5,345 4,931 -
SRA Experiments 5 4 -
Identical Protein Groups 13,356 11,690 -
Bio Project 14 12 -
Bio Sample 16 14 2
Assembly 15 14 -
Taxonomy 2 1 -

Notes:

Comments and References:

Morinière L et al. (2020)
Morinière L, Burlet A, Rosenthal ER, Nesme X, Portier P, Bull CT, Lavire C, Fischer-Le Saux M, Bertolla F. 2020. Clarifying the taxonomy of the causal agent of bacterial leaf spot of lettuce through a polyphasic approach reveals that Xanthomonas cynarae Trébaol et al. 2000 emend. Timilsina et al. 2019 is a later heterotypic synonym of Xanthomonas hortorum Vauterin et al. 1995. Systematic and Applied Microbiology 43(4):126087.
Jones JB et al. (1998)
Jones, J.B., Stall, R.E., and Bouzar, H. "Diversity among xanthomonads pathogenic on pepper and tomato." Ann. Rev. Phytopathol. (1998) 36:41-58. [No PubMed record available.]
Jones JB et al. (2000)
Jones, J.B., Bouzar, H., Stall, R.E., Almira, E.C., Roberts, P.D., Bowen, B.W., Sudberry, J., Strickler, P.M., and Chun, J. "Systematic analysis of xanthomonads (Xanthomonas spp.) associated with pepper and tomato lesions." Int. J. Syst. Evol. Microbiol. (2000) 50:1211-1219.
Jones JB et al. (2004)
Jones, J.B., Lacy, G.H., Bouzar, H., Stall, R.E., and Schaad, N.W. "Reclassification of the xanthomonads associated with bacterial spot disease of tomato and pepper." Syst. Appl. Microbiol. (2004) 27:755-762. [Erratum: Syst. Appl. Microbiol. (2006) 29:85-86.]
Sutic D (1957)
Sutic, D. "Bakterioze crvenog patlidzana (Tomato bacteriosis)." Posebna Izd. Inst. Zasht. Bilja Beograd (Spec. Edit. Inst. Plant Prot. Beograd) 6:1-65. [English summary: Rev. Appl. Mycol. (1957) 36:734-735. [No PubMed record available.]
VALIDATION LIST No. 109 (2006), other link:https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijs.0.64380-0
Validation List No. 109. "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2006) 56:925-927.
Van den Mooter M & Swings J (1990)
Van den Mooter, M., and Swings, J. "Numerical analysis of 295 phenotypic features of 266 Xanthomonas strains and related strains and an improved taxonomy of the genus." Int. J. Syst. Bacteriol. (1990) 40:348-369.
Young JM et al. (2008)
Young, J.M., Park, D.C., Shearman, H.M., and Fargier, E. "A multilocus sequence analysis of the genus Xanthomonas." Syst. Appl. Microbiol. (2008) 31:366-377.

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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