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Taxonomy browser (Ruegeria pomeroyi)

Ruegeria pomeroyi

Taxonomy ID: 89184 (for references in articles please use NCBI:txid89184)
current name
Ruegeria pomeroyi (Gonzalez et al. 2003) Yi et al. 2007 emend. Vandecandelaere et al. 2008
Silicibacter pomeroyi Gonzalez et al. 2003
type strain of Silicibacter pomeroyi: personal::DSS-3, ATCC:700808, DSM:15171
homotypic synonym:
Ruegeria pomeroyi (Gonzalez et al. 2003) Yi et al. 2007
Silicibacter sp. DSS-3
NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Ruegeria
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 943 506 22
Protein 21,726 16,534 -
Structure 64 26 -
Genome 1 1 -
Popset 3 3 -
GEO Datasets 116 34 -
PubMed Central 595 595 -
Gene 8,850 1 -
SRA Experiments 294 216 -
Protein Clusters 3,087 3,087 -
Identical Protein Groups 32,266 31,438 -
BioProject 59 13 -
BioSample 366 225 301
Assembly 15 13 -
PubChem BioAssay 1 - -
Taxonomy 2 1 -

Comments and References:

Gonzalez JM et al. (2003)
Gonzalez, J.M., Covert, J.S., Whitman, W.B., Henriksen, J.R., Mayer, F., Scharf, B., Schmitt, R., Buchan, A., Fuhrman, J.A., Kiene, R.P., and Moran, M.A. "Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments." Int. J. Syst. Evol. Microbiol. (2003) 53(5):1261-1269. Published online 7 February 2003: DOI 10.1099/ijs.0.02491-0
Vandecandelaere I et al. (2008b)
Vandecandelaere, I., Nercessian, O., Segaert, E., Achouak, W., Faimali, M., and Vandamme, P. "Ruegeria scottomollicae sp. nov., isolated from a marine electroactive biofilm." Int. J. Syst. Evol. Microbiol. (2008) 58(12):2726-2733.
Yi H et al. (2007b)
Yi, H., Lim, Y.W., and Chun, J. "Taxonomic evaluation of the genera Ruegeria and Silicibacter: a proposal to transfer the genus Silicibacter Petursdottir and Kristjansson 1999 to the genus Ruegeria Uchino et al. 1999." Int. J. Syst. Evol. Microbiol. (2007) 57(4):815-819.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Ruegeria pomeroyi meta-databases BacDive
2 records from this provider organism-specific BioCyc
Silicibacter pomeroyi GonzA%A1lez et al. 2003 taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Ruegeria pomeroyi culture/stock collections Global Catalogue of Microorganisms
2 records from this provider taxonomy/phylogenetic Ocean Biogeographic Information System
2 records from provider taxonomy/phylogenetic World Register of Marine Species
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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