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Taxonomy browser (Xanthomonas citri pv. malvacearum)

Xanthomonas citri pv. malvacearum

Taxonomy ID: 86040 (for references in articles please use NCBI:txid86040)
current name
Xanthomonas citri pv. malvacearum (Smith 1901) Constantin 2016
type strain of Xanthomonas citri pv. malvacearum: ICPB:10528, ATCC:9924, DSM:3849, ICMP:217, BCCM/LMG:785
pathotype strain of Xanthomonas citri pv. malvacearum: NCPPB:633, WHRI:5232
NCBI BLAST name: g-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic genbank synonym
Xanthomonas citri subsp. malvacearum (ex Smith 1901) Schaad et al. 2007
heterotypic synonym
"Xanthomonas malvacearum" (Smith 1901) Dowson 1939, effective name 1)
heterotypic synonym
Xanthomonas campestris pv. malvacearum (ex Smith 1901) Dye 1978
heterotypic synonym
Xanthomonas campestris (pv. malvacearum)
heterotypic synonym
Xanthomonas axonopodis pv. malvacearum (Smith 1901) Vauterin et al. 1995
heterotypic synonym
"Xanthomonas smithii" Schaad et al. 2005, effective name 1)
heterotypic synonym
"Xanthomonas smithii subsp. smithii" Schaad et al. 2005, effective name 1)
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas citri group; Xanthomonas citri
   Entrez records   
Database name Subtree links Direct links
Nucleotide 1,619 1,174
Protein 46,423 35,836
Genome 1 1
Popset 37 37
PubMed Central 9 9
SRA Experiments 21 21
Identical Protein Groups 10,853 7,484
Bio Project 12 8
Bio Sample 25 21
Assembly 11 7
PubChem BioAssay 1 1
Taxonomy 5 1

Notes:

Comments and References:

Constantin EC et al. (2016)
Constantin, E.C., Cleenwerck, I., Maes, M., Baeyen, S., Van Malderghem, C., De Vos, P., and Cottyn, B. "Genetic characterization of strains named as Xanthomonas axonopodis pv. dieffenbachiae leads to a taxonomic revision of the X. axonopodis species complex." Plant Pathol. (2016) 65:792-806. [No PubMed record available.]
Dowson WJ (1939)
Dowson, W.J. "On the systematic position and generic names of the Gram negative bacterial plant pathogens." Zentrabl. Bakteriol. Parasitenk. Infektionskr. Hyg. Abt. II (1939) 100:177-193. [No PubMed record available.]
Schaad NW et al. (2005)
Schaad, N.W., Postnikova, E., Lacy, G.H., Sechler, A., Agarkova, I., Stromberg, P.E., Stromberg, V.K., and Vidaver, A.K. "Reclassification of Xanthomonas campestris pv. citri (ex Hasse 1915) Dye 1978 forms A, B/C/D, and E as X. smithii subsp. citri (ex Hasse) sp. nov. nom. rev. comb. nov., X. fuscans subsp. aurantifolii (ex Gabriel 1989) sp. nov. nom. rev. comb. nov., and X. alfalfae subsp. citrumelo (ex Riker and Jones) Gabriel et al., 1989 sp. nov. nom. rev. comb. nov.; X. campestris pv. malvacearum (ex smith 1901) Dye 1978 as X. smithii subsp. smithii nov. comb. nov. nom. nov.; X. campestris pv. alfalfae (ex Riker and Jones, 1935) dye 1978 as X. alfalfae subsp. alfalfae (ex Riker et al., 1935) sp. nov. nom. rev.; and "var. fuscans" of X. campestris pv. phaseoli (ex Smith, 1987) Dye 1978 as X. fuscans subsp. fuscans sp. nov." Syst. Appl. Microbiol. (2005) 28:494-518. (Erratum: Syst. Appl. Microbiol. (2006) 29:690-695.)
Schaad NW et al. (2006), other link:http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B7GVX-4M33W19-1&_user=6129429&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000000150&_version=1&_urlVersion=0&_userid=6129429&md5=dccbb5f6ade8644dc8201459997a77c4
Schaad, N.W., Postnikova, E., Lacy, G., Sechler, A., Agarkova, I., Stromberg, P.E., Stromberg, V.K., and Vidaver, A.K. "Emended classification of xanthomonad pathogens on citrus." Syst. Appl. Microbiol. (2006) 29:690-695. [No abstract available.] (Note: Erratum to Schaad et al. 2005.)
Smith EF (1901)
Smith, E.F. "The cultural characters of Pseudomonas hyacinth, Ps. campestri, Ps. phaseoli and Ps. stewarti -- four one-flagellate yellow bacteria parasitic on plants." U.S. Dept. Agr. Div. Veg. Phys. Pathol. Bull. (1901) 28:1-153. [No PubMed record available.]
VALIDATION LIST No. 115 (2007) (Xanthomonas citri subsp. malvacearum), other link:https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijs.0.65207-0
Int. J. Syst. Evol. Microbiol. (2007) 57:893-897.
Vauterin L et al. (1995)
Vauterin, L., Hoste, B., Kersters, K., and Swings, J. "Reclassification of Xanthomonas." Int. J. Syst. Bacteriol. (1995) 45:472-489. [No PubMed record available.]
Michalopoulou VA et al. (2018)
Michalopoulou, V.A., Vicente, J.G., Studholme, D.J., and Sarris, P.F. "Draft genome sequences of pathotype strains for three pathovars belonging to three Xanthomonas species." Microbiol. Resour. Announc. (2018) 7:e00923- 18.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Xanthomonas citri subsp. malvacearum meta-databases BacDive
Xanthomonas citri malvacearum MSCT organism-specific BioCyc
6 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Xanthomonas citri subsp. malvacearum culture/stock collections Global Catalogue of Microorganisms
2728369399: Xanthomonas citri malvacearum MSCT organism-specific Integrated Microbial Genomes
Xanthomonas malvacearum taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
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