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Taxonomy browser (Bacteroides thetaiotaomicron)

Bacteroides thetaiotaomicron

Taxonomy ID: 818 (for references in articles please use NCBI:txid818)
current name
Bacteroides thetaiotaomicron (Distaso 1912) Castellani and Chalmers 1919 (Approved Lists 1980) emend. Hahnke et al. 2016, nom. approb. 1)
type strain of Bacteroides thetaiotaomicron: ATCC:29148, CCUG:10774, CIP:104206, DSM:2079, JCM:5827, NCTC:10582, VPI:5482
homotypic synonym:
"Bacillus thetaiotaomicron" Distaso 1912, effective name 2)
"Sphaerocillus thetaiotaomicron" (Distaso 1912) Prevot 1938, effective name 2)
"Pseudobacterium thetaiotaomicron" (Distaso 1912) Krasil'nikov 1949, effective name 2)
"Bacteroides fragilis subsp. thetaiotaomicron" (Distaso 1912) Holdeman and Moore 1970, effective name 2)
includes:
Bacteroides sp. 1_1_6
bacterium NLAE-zl-C523
bacterium NLAE-zl-C579
bacterium NLAE-zl-G288
bacterium NLAE-zl-H207
bacterium NLAE-zl-H463
bacterium NLAE-zl-H492
bacterium NLAE-zl-P32
bacterium NLAE-zl-P699
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
   Entrez records   
Database name Subtree links Direct links
Nucleotide 17,927 13,810
Protein 200,341 184,188
Structure 392 132
Genome 1 1
Popset 14 14
Conserved Domains 4 4
GEO Datasets 1,188 437
PubMed Central 2,507 2,507
Gene 10,049 5,146
SRA Experiments 349 201
GEO Profiles 6,601 6,601
Protein Clusters 2,860 2,860
Identical Protein Groups 64,214 63,121
Bio Project 87 70
Bio Sample 577 430
Bio Systems 623 467
Assembly 43 37
Probe 27 27
PubChem BioAssay 247 247
Taxonomy 5 1

Notes:

Comments and References:

Castellani A & Chalmers AJ (1919)
Castellani, A., and Chalmers, A.J. Manual of Tropical Medicine, 3rd ed. (1919). Williams Wood and Co., New York. [No PubMed abstract available.]
Cato EP & Johnson JL (1976)
Cato, E.P., and Johnson, J.L. "Reinstatement of species rank for Bacteroides fragilis, B. ovatus, B. distasonis, B. thetaiotaomicron, and B. vulgatus: Designation of neotype strains for Bacteroides fragilis (Veillon and Zuber) Castellani and Chalmers and Bacteroides thetaiotaomicron (Distaso) Castellani and Chalmers." Int. J. Syst. Bacteriol. (1976) 26:230-237. [No PubMed record available.]
Distaso A (1912)
Distaso, A. "Contribution a l'etude sur l'intoxication intestinale." Zentralbl. Bakteriol. Parasitenkd. Infektionskr. Hyg. Abt. I (1912) 62:433-468. [No PubMed record available.]
Hahnke R et al. (2016)
Hahnke, R.L., Meier-Kolthoff, J.P., GarcIa-Lopez, M., Mukherjee, S., Huntemann, M., Ivanova, N.N., Woyke, T., Kyrpides, N.C., Klenk, H.-P., and Goker, M. "Genome-based taxonomic classification of Bacteroidetes." Front. Microbiol. (2016) 7:2003.
Holdeman LV & Moore WEC (1970b)
Holdeman, L.V., and Moore, W.E.C. "Bacteroides." In: E.P. Cato, C.S. Cummins, L.V. Holdeman, J.L. Johnson, W.E.C. Moore, R.M. Smibert, and L.DS. Smith (eds.), Outline of Clinical Methods in Anaerobic Bacteriology, 2nd revision, Virginia Polytechnic Institute, Anaerobe Laboratory, Blacksburg, Virginia, (1970). pp. 33-44. [No PubMed record available.]
List of Changes in Taxonomic Opinion No. 26 (2017)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67:2081-2086.
Krasil'nikov NA (1949)
Krasil'nikov, N.A.: Guide to the Bacteria and Actinomycetes [Opredelitelv Bakterii i Actinomicetov], (1949). Akad. Nauk SSSR, Moscow, pp. 1-830. [No PubMed record available.]
Prevot AR (1938)
Prevot, A.R. "Etudes de systematique bacterienne." Ann. Inst. Pasteur (Paris) (1938) 60:285-307. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Bacteroides thetaiotaomicron meta-databases BacDive
3 records from this provider organism-specific BioCyc
Bacteroides thetaiotaomicron (Distaso 1912) Castellani and Chalmers 1919 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
28 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Bacteroides thetaiotaomicron culture/stock collections Global Catalogue of Microorganisms
12 records from provider organism-specific Integrated Microbial Genomes
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