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Taxonomy browser (Vibrio harveyi)

Vibrio harveyi

Taxonomy ID: 669 (for references in articles please use NCBI:txid669)
current name
Vibrio harveyi (Johnson and Shunk 1936) Baumann et al. 1981
type strain of Vibrio harveyi: ATCC:14126, CCUG:28584, CIP:103192, IFO:15634, NBRC:15634, BCCM/LMG:4044, NCCB:80033, NCTC:12970, NCIMB:1280, CAIM:513, DSM:19623, CECT:525, KCTC:12724
homotypic synonym:
"Achromobacter harveyi" Johnson and Shunk 1936, effective name 1)
"Pseudomonas harveyi" (Johnson and Shunk 1936) Breed 1948, effective name 1)
"Photobacterium harveyi" (Johnson and Shunk 1936) Breed and Lessel 1954, effective name 1)
Beneckea harveyi (Johnson and Shunk 1936) Reichelt and Baumann 1973 (Approved Lists 1980), nom. approb. 2)
Lucibacterium harveyi (Johnson and Shunk 1936) Hendrie et al. 1970 (Approved Lists 1980), nom. approb. 2)
includes:
Vibrio sp. HENC-01
Vibrio sp. HENC-02
Vibrio sp. PG 001
Vibrio sp. PG 002
Vibrio sp. PG 006
Vibrio sp. PG 007
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Vibrio carchariae Grimes et al. 1985
type strain of Vibrio carchariae: ATCC:35084, BCCM/LMG:7890, CCUG:19116, personal::1116b
heterotypic synonym
Vibrio trachuri Iwamoto et al. 1996
type strain of Vibrio trachuri: personal::T9210, BCCM/LMG:19643, JCM:9677
heterotypic synonym
Beneckea neptuna
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio harveyi group
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 39,209 36,521 1,069
Protein 270,793 258,562 -
Structure 67 52 -
Genome 1 1 -
Popset 240 240 -
GEO Datasets 91 83 -
PubMed Central 3,590 3,590 -
Gene 16,546 16,546 -
SRA Experiments 125 118 -
Protein Clusters 4,236 4,236 -
Identical Protein Groups 195,669 189,472 -
BioProject 85 74 -
BioSample 418 402 15
Assembly 143 133 4
PubChem BioAssay 130 130 -
Taxonomy 9 1 -

Notes:

Comments and References:

image:Vibrio harveyi
Baumann P et al. (1980)
Baumann, P., Baumann, L., Bang, S.S., and Woolkalis, M.J. "Reevaluation of the taxonomy of Vibrio, Beneckea, and Photobacterium: abolition of the genus Beneckea." Curr. Microbiol. (1980) 4:127-132. [No PubMed record available.]
Gauger EJ & Gomez-Chiarri M (2002)
Gauger, E.J., and Gomez-Chiarri, M. "16S ribosomal DNA sequencing confirms the synonymy of Vibrio harveyi and V. carchariae." Dis. Aquat. Org. (2002) 52:39-46.
Grimes DJ et al. (1984)
Grimes, D.J., Stemmler, J., Hada, H., May, E.B., Maneval, D., Hetrick, F.M., Jones, R.T., Stoskopf, M., and Colwell, R.R. "Vibrio species associated with mortality of sharks held in captivity." Microb. Ecol. (1984) 10:271-282.
Iwamoto Y et al. (1995)
Iwamoto, Y., Suzuki, Y., Kurita, A., Watanabe, Y., Shimizu, T., Ohgami, H., and Yanagihara, Y. "Vibrio trachuri sp. nov., a new species isolated from diseased Japanese horse mackerel." Microbiol. Immunol. (1995) 39:831-837.
Pedersen K et al. (1998)
Pedersen, K., Verdonck, L., Austin, B., Austin, D.A., Blanch, A.R., Grimont, P.A.D., Jofre, J., Koblavi, S., Larsen, J.L., Tiainen, T., Vigneulle, M., and Swings, J. "Taxonomic evidence that Vibrio carchariae Grimes et al. 1985 is a junior synonym of Vibrio harveyi (Johnson and Shunk 1936) Baumann et al. 1981." Int. J. Syst. Bacteriol. (1998) 48:749-758. [No PubMed record available.]
Skerman VBD et al. (1980) (Beneckea harveyi)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Skerman VBD et al. (1980) (Lucibacterium harveyi)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Thompson FL et al. (2002b)
Thompson, F.L., Hoste, B., Vandemeulebroecke, K., Engelbeen, K., Denys, R., and Swings, J. "Vibrio trachuri Iwamoto et al. 1995 is a junior synonym of Vibrio harveyi (Johnson and Shunk 1936) Baumann et al. 1981." Int. J. Syst. Evol. Microbiol. (2002) 52:973-976. (Published online 30 November 2001. DOI 10.1099/ijs.0.02046-0)
VALIDATION LIST No. 6 (1981) (Vibrio harveyi )
VALIDATION LIST No. 6. Int. J. Syst. Bacteriol. (1981) 31:215-218.
VALIDATION LIST No. 17 (1985) (Vibrio carchariae)
VALIDATION LIST No. 17. Int. J. Syst. Bacteriol. (1985) 35:223-225.
VALIDATION LIST No. 57 (1996) (Vibrio trachuri)
VALIDATION LIST No. 57. Int. J. Syst. Bacteriol. (1996) 46:625-626.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Vibrio harveyi meta-databases BacDive
4 records from this provider organism-specific BioCyc
10 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Vibrio harveyi culture/stock collections Global Catalogue of Microorganisms
30 records from this provider organism-specific Integrated Microbial Genomes
Vibrio harveyi taxonomy/phylogenetic Lifemap
3 records from this provider taxonomy/phylogenetic Ocean Biogeographic Information System
3 records from this provider taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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